KEGG   Phocoena sinus (vaquita): 116742411
Entry
116742411         CDS       T07759                                 
Symbol
CHMP4C
Name
(RefSeq) charged multivesicular body protein 4c isoform X1
  KO
K24782  charged multivesicular body protein 4C
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04144  Endocytosis
psiu04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    116742411 (CHMP4C)
  09143 Cell growth and death
   04217 Necroptosis
    116742411 (CHMP4C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:psiu04131]
    116742411 (CHMP4C)
   03400 DNA repair and recombination proteins [BR:psiu03400]
    116742411 (CHMP4C)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psiu04147]
    116742411 (CHMP4C)
Membrane trafficking [BR:psiu04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    116742411 (CHMP4C)
DNA repair and recombination proteins [BR:psiu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    116742411 (CHMP4C)
Exosome [BR:psiu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   116742411 (CHMP4C)
  Exosomal proteins of colorectal cancer cells
   116742411 (CHMP4C)
SSDB
Motif
Pfam: Snf7 DUF447_C
Other DBs
NCBI-GeneID: 116742411
NCBI-ProteinID: XP_032465930
Ensembl: ENSPSNG00000007414
LinkDB
Position
17:24967774..24996283
AA seq 237 aa
MSKLGKFFKGGGSSKSRAAPSSQEALARLRETEEMLSKKQEYLENRIQRELSLARKHGTK
NKRAALQALKRKKRFEKQLTQIDGTLSTIEFQREALENSHTNTEVLRNMGIAAKAMKAVH
ENMDLNKIDDLMQEIAEQQDVAQEISEAFSQRVGFDDNFDEDELMAELEELEQEELNKKM
ANIRLPNVPSSSLPAQPDRIPGRMSSTSSSAHRSRAASSRRAEEEDDDIKQLAAWAT
NT seq 714 nt   +upstreamnt  +downstreamnt
atgagcaagttgggcaagttctttaaagggggaggctcttccaagagccgagctgctccc
agctcccaggaagccctggctcgacttcgggagacagaagagatgctgagcaagaaacaa
gagtacctggaaaatcgaatccagagagagctcagcctggccaggaagcacggcacgaag
aataaacgagctgcattacaggcactaaagagaaagaagaggtttgagaagcagctcact
cagattgatggcaccctttccaccattgagttccagagagaagccttggaaaactcacac
accaacacagaagtgttaaggaacatgggcattgcagcaaaagccatgaaagcagttcat
gaaaacatggatctgaacaaaatagatgatttgatgcaagagattgcagagcaacaggat
gttgcccaagaaatctcagaagcgttttctcaacgagttggatttgacgataactttgat
gaggatgagctgatggcagaacttgaggaactggagcaggaagaattaaataagaagatg
gcaaatatccgacttccaaatgtgccttcctcctccctcccagcacagccagacagaata
ccaggtcgcatgtctagcacatcctcctctgcacatcgatcccgagcagcatcttccagg
agggcagaagaagaggatgatgatatcaaacaattggcagcttgggctacttaa

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