KEGG   Phocoena sinus (vaquita): 116742443
Entry
116742443         CDS       T07759                                 
Symbol
SF3B4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116742443 (SF3B4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psiu03041]
    116742443 (SF3B4)
Spliceosome [BR:psiu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    116742443 (SF3B4)
 Complex B
    116742443 (SF3B4)
 Complex C
   U2 SnRNP specific factors
    116742443 (SF3B4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 116742443
NCBI-ProteinID: XP_032465985
Ensembl: ENSPSNG00000001286
UniProt: A0A8C9B0R7
LinkDB
Position
1:complement(109515391..109520152)
AA seq 424 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPPPGMPPP
GSFPPPVPPPGALPPGIPPAMPPPPMPPGAGGHGPPSAGTPGAGHPGHGHSHPHPFPPGG
MPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGS
PMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVPPRGPLRG
PLPQ
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggcggccgggccgatctccgagcggaaccaggatgccactgtgtatgtggggggcctc
gatgagaaggttagcgaaccgctgctgtgggagctatttctccaggcagggccagtagtc
aacacccacatgccaaaggatagagtcactggtcagcaccaaggctatggctttgtggaa
ttcttgagtgaggaagatgctgactatgccattaagatcatgaacatgatcaaactctat
gggaaaccaatacgggtgaacaaggcatcagctcacaacaaaaacctggatgtgggggcc
aacattttcattgggaacctggacccagagatcgatgagaagttgctttatgatactttc
agcgcctttggggtcatcttacaaacccccaagattatgcgggaccctgacacaggcaac
tccaaaggttatgcctttattaacttcgcttcgtttgatgcttcggatgcagcgattgag
gccatgaatgggcagtacctctgtaaccgcccaatcaccgtgtcctatgctttcaagaag
gactccaaaggtgaacgccatggctcagccgctgaacgacttctggcagcacagaaccca
ctctcccaggctgaccgccctcatcagctgtttgcagatgcaccccctccaccctctgct
ccgaatcctgtggtatcatcactggggtctgggcttcctccaccaggcatgcctcctcct
ggctccttcccaccaccagtaccgcctcctggagcccttccacctgggatacccccagcc
atgcccccaccacctatgcctcctggagctggaggacatggccccccatcagcaggaacc
ccaggggctggacatcctggacatggacactcacatcctcacccattcccaccgggtggg
atgccccatccagggatgtctcagatgcagctggcccaccatggccctcatggcttagga
cacccccatgctgggccccctggctctggggggcagccaccaccccgaccaccacctgga
atgcctcatcctggacctcctccaatgggcatgcccccccgagggcctccgttcggctct
cccatgggtcacccaggtcctatgcctccgcatggtatgcgtggacctcctccactgatg
ccccctcatggatacactggccctccacgacctccaccctacggctaccagcgggggccc
ctccctccacccagacccactccccggcctccagttccccctcgaggcccacttcgaggc
cctctccctcagtga

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