Phocoena sinus (vaquita): 116742451
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Entry
116742451 CDS
T07759
Symbol
CTHRC1
Name
(RefSeq) collagen triple helix repeat-containing protein 1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psiu03037
]
116742451 (CTHRC1)
Cilium and associated proteins [BR:
psiu03037
]
Other cilia and associated proteins
Stereociliary proteins
116742451 (CTHRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
116742451
NCBI-ProteinID:
XP_032465989
Ensembl:
ENSPSNG00000020136
UniProt:
A0A8C9CUR4
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All DBs
Position
17:46712137..46724855
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AA seq
285 aa
AA seq
DB search
MQPAVASERGGAGLGSRLGSRVASSSSSSSPALRVPGPPRAMRLQGPATGSPQRLLGILL
LLLLQLQAPSSASETPKGKQKAVLRQREVVDLYNGMCLQGPAGVPGRDGSPGTNGIPGTP
GVPGRDGFKGEKGECLREVFEEPWTPNYKQCSWSSLNYGIDLGKIAECTFTKMRSNSALR
VLFSGSLRLKCRSACCQRWYFTFNGAECSGPLPIEAIIYLDQGSPELNSTINIHRTSSVE
GLCEGIGAGLVDIAIWVGTCSDYPKGDASTGWNSVSRIIIEELPK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcagccggcggtggcctcggagcgcggcggggccggactgggatcacgtctcggctcc
cgggtcgcctcctcctcctcctcctcctcgcctgctctgcgcgtcccggggccgccgcgc
gccatgcgcctccagggccccgccaccggctccccgcagcggctcctcggcatcctgctg
ctcctgctgctgcagctgcaggcgccgtcgagcgcctccgagacccccaaggggaagcaa
aaggctgtgctccggcagagggaggtggtggacctgtataatggcatgtgcttacaaggg
cccgcgggggtgcctgggcgagatgggagcccagggaccaatggcatccctggcacccct
ggggtcccaggtcgagatggattcaaaggagaaaagggggaatgcctgagggaagtcttt
gaggagccctggacgcctaactataagcagtgttcatggagttcactgaattatggcata
gaccttggaaaaattgcggagtgtacattcacaaagatgcgttcgaacagcgccctaaga
gtcttgttcagtggctcgcttcggttaaaatgcagaagcgcatgctgtcagcgttggtat
ttcacgttcaatggagctgaatgttcaggacctcttcctattgaagccataatttatttg
gaccaaggaagccctgaactgaattcgacaattaatattcatcgcacttcctctgtggaa
ggactctgtgaaggaattggtgccggactagtggacattgctatctgggttggaacttgc
tcagattacccgaaaggagatgcctctacggggtggaattcagtgtctcgtatcattatt
gaagagctaccaaaataa
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