Phocoena sinus (vaquita): 116742453
Help
Entry
116742453 CDS
T07759
Symbol
VPS28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog isoform X1
KO
K12184
ESCRT-I complex subunit VPS28
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116742453 (VPS28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116742453 (VPS28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116742453 (VPS28)
Membrane trafficking [BR:
psiu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
116742453 (VPS28)
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116742453 (VPS28)
Exosomal proteins of other body fluids (saliva and urine)
116742453 (VPS28)
Exosomal proteins of colorectal cancer cells
116742453 (VPS28)
Exosomal proteins of bladder cancer cells
116742453 (VPS28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
116742453
NCBI-ProteinID:
XP_032465991
Ensembl:
ENSPSNG00000022056
LinkDB
All DBs
Position
17:complement(79133297..79138093)
Genome browser
AA seq
243 aa
AA seq
DB search
MPVSGRSESSTQAACLPHTEGQKNMGSAQGNGSQEASARGGVRGAAKHGALPQRHLGYDN
MAELFAVVKTMQALEKAYIKDCVSPNEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRK
FRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLR
ELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDELDDSQVRQMLFDLESAYNAFNRF
LHA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgagcgggagaagtgagtccagcacccaggctgcctgcctcccccatactgag
ggtcagaagaacatggggtcggcccagggaaacgggtcccaagaagcctctgccaggggt
ggggtgagaggggcagccaaacacggagctctgcctcagcggcaccttgggtatgacaac
atggcagagctgtttgcagttgtgaagacgatgcaggctctggagaaggcgtacatcaag
gactgcgtcagccccaacgagtacactgcagcctgctcgcggctcctggtccagtacaaa
gctgccttccggcaggtacaagggtcagagatcagctccatcgatgaattctgccgcaag
ttccgactggactgcccgcttgccatggagaggatcaaggaggaccggcccatcaccatc
aaggacgacaagggcaacctgaatcgctgcatcgccgacgtggtctcgctcttcatcaca
gtgatggacaagctgcgcctggagatccgggccatggacgagatccagcccgacctgcgg
gagctgatggagaccatgcaccgcatgagccacctgccccctgacttcgagggccgccag
acggtcagccagtggctgcagaccctgagtggcatgtcagcctcagacgagctggacgac
tcccaggtgcgccagatgctcttcgacctggaatcagcctacaacgccttcaaccgcttc
ctgcacgcctga
DBGET
integrated database retrieval system
