Phocoena sinus (vaquita): 116742490
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Entry
116742490 CDS
T07759
Symbol
CDH17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09160 Human Diseases
09162 Cancer: specific types
05226 Gastric cancer
116742490 (CDH17)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psiu04515
]
116742490 (CDH17)
Cell adhesion molecules [BR:
psiu04515
]
Cadherins
Major cadherins
116742490 (CDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Cadherin_CELSR2_9th
Fibulin_C
RibLong
Motif
Other DBs
NCBI-GeneID:
116742490
NCBI-ProteinID:
XP_032466060
Ensembl:
ENSPSNG00000012164
UniProt:
A0A8C9BYQ3
LinkDB
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Position
17:complement(38101236..38200219)
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AA seq
832 aa
AA seq
DB search
MTMQAQLHCLCLFTLYLTTGYGQEEKFSGPLKPMTFSIFEGQGTNQIIFQFKASPLAVTF
KLTGETDDVFQIQPDGLLYHSKALDRETRAVHKLQVSALDAHGNTVEGPVPITIEVKDIN
DNRPVFLQTKYEGSVRQNSRPGKPFMYVNATDLDDPATPNGQLIYKIIMQLPKVNNVMYF
QINNKTGAISLTLAGSQELDPLKNPSYKLVVSVEDMRGQNEHSFSGTTSVDITVKENIWK
APEPVEIEENSTNPYPIKITQVQWNEPGALYSLVEKEKTSKFPFLIDQEGDIYVTQPLDR
EEKDAYVFYAVARDEYRKPLALPLEIQVKVKDINDNPPTCPSTVTVLEVQENEQIGSSIG
TLIAHDMDEENTINSVLGYRIVDQTPKVPRDGLFLVQAYSGMFQLALQSLRKQDTPQYNL
TVEVSDKDFKTLCFVQVDIIDINDQIPIFEKSDYGNLTLPEDTAIGTVILTIQATDADEP
YTGSSKILYRITQGDSEEYLEIETDPETNTGYVKVKKPLDFEAVDVYNIVFQAENPEPLV
LDVQYNASSSATFRLIVTNVNEAPQFSQQLYQAKVREDVAKGTKVGNVTAKDPEGLDISY
SLRGDKRGWLKIDPVTGEIFSVAPLDREAESLYRVQVVATEVGGSSLSSTAQFHLTLMDV
NDNPPRLVKEYTGLFFCYPPKAPGSLIFEATDDDQQSFRGRHFTFSLGSESLQKDWEVSK
INGTHARLSTKHTGFEERVYHIPVRINDSGRPPLEGTVSLSVTFCKCVENRCFQPAGHMP
GIPTVGITVGVLLTTFLVIGIILAVVFFQIKKNKGQHNVESAQASEVKPLRN
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcaagcccaactgcactgcttgtgtctctttacactttacttgacaactgga
tatggccaagaggaaaagtttagtggacccctgaagcccatgaccttttctatttttgaa
ggccaaggaacgaatcaaatcatattccagtttaaggccagtcctcttgctgtgactttc
aaactaactggggagacagatgacgtatttcagatacaaccagatggacttctgtatcac
agcaaagccctggacagggaaacaagagctgttcacaaactccaggtctcagccctggat
gctcacggcaatacagtggagggcccagtccccatcaccatagaagtgaaggacatcaac
gacaatcgacctgtgtttctccagacaaagtatgaaggctcagtaaggcagaattctcgc
ccaggaaagccctttatgtatgtcaatgctacagacttggatgatccagccacacccaac
ggccagcttatttataaaattatcatgcagcttcccaaggtcaacaatgtcatgtacttt
cagatcaacaacaaaacaggggcaatttcacttactctagcaggatcccaggaactggat
cctttgaagaatccttcctacaagctggtggtctcagtggaggacatgcgaggccagaat
gagcattcctttagtggcaccacatctgtggatattacggtgaaggagaatatttggaaa
gcaccagaaccagtggagattgaagaaaattcaactaatccttaccccattaaaatcact
caggtgcagtggaacgaaccaggtgcgttatattcattagtggaaaaggagaagacatca
aaattcccatttttaattgaccaggaaggagatatctatgtgactcagcccttggaccga
gaagaaaaggatgcatatgttttttatgcggttgcaagggatgagtacagaaaaccactc
gcacttccactggaaattcaagtgaaagttaaagacattaatgataatccacctacgtgt
ccatctacagtgactgtacttgaggtccaggagaatgaacaaatagggagcagtattgga
acacttattgctcatgacatggatgaagaaaacactatcaacagtgttttaggatacaga
attgtggatcaaacccccaaagttcctagagatggactcttcctggtccaagcctactca
ggaatgttccagttagccttgcagtccttgcggaagcaagacaccccgcagtacaacttg
acagtagaggtgtctgacaaagatttcaagaccctctgctttgtgcaggtcgacattatt
gatatcaatgatcagatccccatctttgaaaaatcagattatggaaacctaactctccct
gaagatacagccattggaactgtcatcttaaccatccaggccaccgatgctgatgaacca
tatacgggaagttctaaaatcctgtaccgaattacacagggagacagtgaggaatatttg
gagattgaaacagatcccgaaaccaatactggatatgtcaaggttaaaaagcctcttgat
tttgaagcagtagatgtttacaatattgtgttccaagcagaaaacccggagcctctggtg
cttgatgtacagtacaatgccagctcttctgctacattcagacttattgtgacaaatgtg
aatgaagcaccgcaattttcccaacaactataccaagcaaaagtcagagaggatgtggct
aaaggcactaaagtgggcaacgtgactgccaaggatccggaaggtctggacataagttat
tcattaagaggtgacaagagaggttggctaaaaattgaccccgtcaccggcgagatcttt
agtgtggctccgttggacagggaagctgaaagtctgtatcgggtacaagtggtggcaaca
gaagtaggtggatcctccttgagttccacggcgcaattccacctgaccctcatggatgtg
aacgacaacccgccgcggctggtcaaggagtacacaggcttgttcttctgctatccccct
aaagcacccggaagtctcattttcgaggccactgatgatgatcagcagtcatttcggggt
cgacactttacattttcccttggcagtgaaagcttacaaaaagactgggaagtttccaaa
atcaatggaactcatgccaggctctccaccaagcacacgggctttgaggagagagtttac
cacatcccagtccgcatcaatgatagcggtcggccacccttggaagggactgtctcttta
tcagttactttctgcaagtgtgtggaaaataggtgtttccagccagcaggtcacatgcct
gggatacctactgtgggcatcacagttggtgtactccttaccacctttttggtcatcggt
ataattttagctgtcgtgtttttccagataaagaagaataaaggccaacataatgttgaa
agtgctcaggcatctgaagtcaagcctctgagaaactga
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