KEGG   Phocoena sinus (vaquita): 116742494
Entry
116742494         CDS       T07759                                 
Symbol
NBN
Name
(RefSeq) LOW QUALITY PROTEIN: nibrin
  KO
K10867  nibrin
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03440  Homologous recombination
psiu04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    116742494 (NBN)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    116742494 (NBN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psiu03032]
    116742494 (NBN)
   03400 DNA repair and recombination proteins [BR:psiu03400]
    116742494 (NBN)
DNA replication proteins [BR:psiu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    116742494 (NBN)
DNA repair and recombination proteins [BR:psiu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     116742494 (NBN)
    BRCA1-C complex
     116742494 (NBN)
SSDB
Motif
Pfam: Nbs1_C NIBRIN_BRCT_II FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl PTCB-BRCT
Other DBs
NCBI-GeneID: 116742494
NCBI-ProteinID: XP_032466064
Ensembl: ENSPSNG00000009479
LinkDB
Position
17:complement(33500963..33545331)
AA seq 749 aa
MWKLLPAAGRAQEPYRLLAGVEYIVGRKNCGILIEDDQSISRNHAVLTANFSVTNLSQTD
EIPVLTIKDNSKYGTFVNEEKMQNGLSRILKTGDRVTFGVFESKFRVEYEPLVACSSCLD
VSGKTALSQAVLQLGGLTVNNWTEECTHLVMTSVKVTIKTICALICGRPIVKPEYFTEFL
KTVQSKKQPPEIESFYPPIDEPVIGSKNIDLSERQERKQVFKGKTFVFLNAKQHKKLSAA
VVFGGGDARLITEDNEEEDSFFSAPGTCVVDVGITESQTLIPDSQKKRIHSIMDILQRQG
LRPIPEAEIGLAVIFITTENYCDPQGQPSTGLKTTTPGPSLSQVLPANENLMPGAPVNTT
TYVADTQSEQGDKCMNLSERPKEIKIFGMEQKFRIPSQETSTVKEPHKVNSSNNNIVSNT
LVSMKIPKYQLSPTKFPGVNKSGDWASQHQQTNSIKNYFQPSTKKRERDEENQEMSLSKS
ARIEMSCSLLEQTQPTTSSAWNNKEQQNEPVERNPDNSYADIDLKSTVKNSANKSLSTEK
LRSEKRKEIDDLAIEGEVLEQLLKNTKPELEIEVKVQKQEEDVNIRKRPRLDIETNGPCN
DEAIPESNKISQENEIAKKCELKXSLWSTKELSNNDELQGDGEMLPKTVLLTEFRSLVVR
NSTSRNASSVNNDYGELKNFKKFKKVKFPGARKLPHIIGGSDLIAHHTRKTTELEEWLRQ
EMEVQNQHAKEESLADELFRYNPNVKRRR
NT seq 2250 nt   +upstreamnt  +downstreamnt
atgtggaagttgctcccagctgcgggccgtgcccaagaaccatacagacttttggctggt
gttgagtacattgttggaaggaaaaactgtggcattctaattgaagatgatcaatcaatc
agccgaaatcatgctgtattaactgctaacttttctgtaactaacctgagtcaaacagat
gaaatccctgtattgacaataaaagataattctaagtatggtacgtttgttaatgaggaa
aaaatgcagaatggcctttcccgaattttgaagacaggggatagagttacctttggagtg
tttgaaagtaaattcagagtagagtatgaacctttggttgcatgctcttcttgtttagat
gtctctgggaaaactgctttaagtcaagctgtattgcaacttggaggacttactgtaaac
aattggacagaggaatgtactcaccttgtcatgacatcagttaaagttaccattaaaaca
atatgtgcactcatttgtgggcgtccgattgtaaaaccagaatattttactgaatttctt
aaaacagttcagtccaagaaacagcctccagaaattgaaagtttttacccacctattgat
gaaccagttattggaagtaaaaatattgatctgtcagaacgacaggaaagaaaacaagtc
ttcaaagggaaaacatttgtctttctaaatgccaaacagcataaaaaattaagtgcagca
gttgtatttggaggaggagatgctaggttgataacagaagacaatgaagaagaagatagt
ttcttttcggctcctggaacttgtgttgttgatgtaggaataacagagtcacagacctta
attcctgactctcagaaaaaacggattcattcaattatggatatactccagaggcaaggt
cttagacctattcctgaagcagaaattggattggcagttattttcattactacagagaat
tactgtgatcctcagggccagcccagtacaggattgaagacaacaactccaggtccaagc
ctttcccaagtcttaccagccaatgaaaacttaatgccaggtgccccagtgaatactaca
acatatgtagctgatacacaatcagagcaaggagataaatgtatgaatttgagtgaaagg
ccaaaagaaatcaaaatcttcggaatggaacaaaagttcagaataccttcacaagaaaca
tccactgtgaaggaaccccacaaagtaaactctagtaataataatatagtatcaaatact
cttgttagtatgaaaatcccaaaatatcagctttcaccaactaaattcccaggtgtaaat
aaaagtggagattgggcttctcagcatcagcaaaccaactccatcaaaaactactttcag
ccatctaccaaaaaaagggaaagggatgaagaaaatcaagaaatgtctttatctaaatca
gcaagaatagaaatgtcttgttctcttttagaacaaacacagcctactacatcctcagca
tggaacaataaggagcagcagaatgagcctgtggaaagaaacccagataactcgtatgca
gatatagatttaaaatccactgtgaaaaattctgccaataaatctctctctacagaaaaa
ctaagatcagaaaaaagaaaagaaattgatgatttagccatagaaggtgaagtattggaa
cagttattgaagaacacaaaaccagagttagaaattgaagtgaaagttcaaaaacaagag
gaagatgtcaatattagaaaaaggccaagattggatatagaaacaaatggcccttgtaat
gatgaagcaataccagaaagtaacaaaatctctcaagaaaatgaaattgcgaagaagtgt
gagctcaagnaatcactctggtcaactaaagaactatctaacaatgatgaacttcagggt
gatggtgagatgcttccaaagacggtgttactgactgaatttaggtcactggtggttcgt
aactctacttccagaaatgcatccagtgtaaataatgattatggtgaactaaagaatttc
aagaaattcaaaaaggtcaaatttcctggagcaagaaaacttccacacatcattggagga
tcagatctaatagctcatcatacccgaaagactacagaattagaggagtggttgaggcag
gaaatggaggtgcaaaatcaacatgccaaagaagaatctcttgccgatgaactctttaga
tacaaccctaatgtaaaaaggagaagataa

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