Phocoena sinus (vaquita): 116742494
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Entry
116742494 CDS
T07759
Symbol
NBN
Name
(RefSeq) LOW QUALITY PROTEIN: nibrin
KO
K10867
nibrin
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03440
Homologous recombination
psiu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116742494 (NBN)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
116742494 (NBN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psiu03032
]
116742494 (NBN)
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116742494 (NBN)
DNA replication proteins [BR:
psiu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
116742494 (NBN)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
116742494 (NBN)
BRCA1-C complex
116742494 (NBN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
RTT107_BRCT_5
BRCT
Yop-YscD_cpl
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
116742494
NCBI-ProteinID:
XP_032466064
Ensembl:
ENSPSNG00000009479
LinkDB
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Position
17:complement(33500963..33545331)
Genome browser
AA seq
749 aa
AA seq
DB search
MWKLLPAAGRAQEPYRLLAGVEYIVGRKNCGILIEDDQSISRNHAVLTANFSVTNLSQTD
EIPVLTIKDNSKYGTFVNEEKMQNGLSRILKTGDRVTFGVFESKFRVEYEPLVACSSCLD
VSGKTALSQAVLQLGGLTVNNWTEECTHLVMTSVKVTIKTICALICGRPIVKPEYFTEFL
KTVQSKKQPPEIESFYPPIDEPVIGSKNIDLSERQERKQVFKGKTFVFLNAKQHKKLSAA
VVFGGGDARLITEDNEEEDSFFSAPGTCVVDVGITESQTLIPDSQKKRIHSIMDILQRQG
LRPIPEAEIGLAVIFITTENYCDPQGQPSTGLKTTTPGPSLSQVLPANENLMPGAPVNTT
TYVADTQSEQGDKCMNLSERPKEIKIFGMEQKFRIPSQETSTVKEPHKVNSSNNNIVSNT
LVSMKIPKYQLSPTKFPGVNKSGDWASQHQQTNSIKNYFQPSTKKRERDEENQEMSLSKS
ARIEMSCSLLEQTQPTTSSAWNNKEQQNEPVERNPDNSYADIDLKSTVKNSANKSLSTEK
LRSEKRKEIDDLAIEGEVLEQLLKNTKPELEIEVKVQKQEEDVNIRKRPRLDIETNGPCN
DEAIPESNKISQENEIAKKCELKXSLWSTKELSNNDELQGDGEMLPKTVLLTEFRSLVVR
NSTSRNASSVNNDYGELKNFKKFKKVKFPGARKLPHIIGGSDLIAHHTRKTTELEEWLRQ
EMEVQNQHAKEESLADELFRYNPNVKRRR
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagttgctcccagctgcgggccgtgcccaagaaccatacagacttttggctggt
gttgagtacattgttggaaggaaaaactgtggcattctaattgaagatgatcaatcaatc
agccgaaatcatgctgtattaactgctaacttttctgtaactaacctgagtcaaacagat
gaaatccctgtattgacaataaaagataattctaagtatggtacgtttgttaatgaggaa
aaaatgcagaatggcctttcccgaattttgaagacaggggatagagttacctttggagtg
tttgaaagtaaattcagagtagagtatgaacctttggttgcatgctcttcttgtttagat
gtctctgggaaaactgctttaagtcaagctgtattgcaacttggaggacttactgtaaac
aattggacagaggaatgtactcaccttgtcatgacatcagttaaagttaccattaaaaca
atatgtgcactcatttgtgggcgtccgattgtaaaaccagaatattttactgaatttctt
aaaacagttcagtccaagaaacagcctccagaaattgaaagtttttacccacctattgat
gaaccagttattggaagtaaaaatattgatctgtcagaacgacaggaaagaaaacaagtc
ttcaaagggaaaacatttgtctttctaaatgccaaacagcataaaaaattaagtgcagca
gttgtatttggaggaggagatgctaggttgataacagaagacaatgaagaagaagatagt
ttcttttcggctcctggaacttgtgttgttgatgtaggaataacagagtcacagacctta
attcctgactctcagaaaaaacggattcattcaattatggatatactccagaggcaaggt
cttagacctattcctgaagcagaaattggattggcagttattttcattactacagagaat
tactgtgatcctcagggccagcccagtacaggattgaagacaacaactccaggtccaagc
ctttcccaagtcttaccagccaatgaaaacttaatgccaggtgccccagtgaatactaca
acatatgtagctgatacacaatcagagcaaggagataaatgtatgaatttgagtgaaagg
ccaaaagaaatcaaaatcttcggaatggaacaaaagttcagaataccttcacaagaaaca
tccactgtgaaggaaccccacaaagtaaactctagtaataataatatagtatcaaatact
cttgttagtatgaaaatcccaaaatatcagctttcaccaactaaattcccaggtgtaaat
aaaagtggagattgggcttctcagcatcagcaaaccaactccatcaaaaactactttcag
ccatctaccaaaaaaagggaaagggatgaagaaaatcaagaaatgtctttatctaaatca
gcaagaatagaaatgtcttgttctcttttagaacaaacacagcctactacatcctcagca
tggaacaataaggagcagcagaatgagcctgtggaaagaaacccagataactcgtatgca
gatatagatttaaaatccactgtgaaaaattctgccaataaatctctctctacagaaaaa
ctaagatcagaaaaaagaaaagaaattgatgatttagccatagaaggtgaagtattggaa
cagttattgaagaacacaaaaccagagttagaaattgaagtgaaagttcaaaaacaagag
gaagatgtcaatattagaaaaaggccaagattggatatagaaacaaatggcccttgtaat
gatgaagcaataccagaaagtaacaaaatctctcaagaaaatgaaattgcgaagaagtgt
gagctcaagnaatcactctggtcaactaaagaactatctaacaatgatgaacttcagggt
gatggtgagatgcttccaaagacggtgttactgactgaatttaggtcactggtggttcgt
aactctacttccagaaatgcatccagtgtaaataatgattatggtgaactaaagaatttc
aagaaattcaaaaaggtcaaatttcctggagcaagaaaacttccacacatcattggagga
tcagatctaatagctcatcatacccgaaagactacagaattagaggagtggttgaggcag
gaaatggaggtgcaaaatcaacatgccaaagaagaatctcttgccgatgaactctttaga
tacaaccctaatgtaaaaaggagaagataa
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