Phocoena sinus (vaquita): 116742500
Help
Entry
116742500 CDS
T07759
Symbol
EXOSC4
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116742500 (EXOSC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116742500 (EXOSC4)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
116742500 (EXOSC4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
116742500 (EXOSC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
116742500
NCBI-ProteinID:
XP_032466071
Ensembl:
ENSPSNG00000021001
LinkDB
All DBs
Position
17:78867417..78869336
Genome browser
AA seq
245 aa
AA seq
DB search
MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTXALAVVYGPHEIRG
SRARALPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAVLTQLHPRSQ
IDIYVQVLQADGGTYAACVNAATLAVLDAGIPMRDFVCACSAGFVDGTALADLSHVEEAA
GGPQLALALLPSSGQIALLEMDARLHEDQLEQVLEAAAQAARDVHTLLDRVVRQHVQEAS
ILLGD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcgggactggagcttctgtcggaccagggctaccgggtggacgggcggcgcgccggg
gagctgcgtaagatccaggcgcggatgggtgtattcgcgcaggccgacggctcggcctac
atcgagcagggcaacaccnaggcgttagcggtggtctacgggcctcacgagatccggggc
tcccgggcacgagccctgcctgacagggccctggtgaactgtcagtacagttctgcgacc
ttcagcacaggtgagcgcaagcggcggccgcacggggaccgtaaatcctgcgagatgggc
ctgcagttgcgtcaaaccttcgaggcagccgtccttacacagctgcatccacgctcccag
attgatatctatgtgcaggtgctgcaggcagatggtggcacctacgcggcttgtgtgaat
gcagccacgctggcagtgttggatgcagggatacccatgcgggactttgtgtgtgcctgc
tcagctggctttgtggatgggacagccctggcagacctcagccacgtggaggaagcagct
ggcggcccccagctggccctggccctgctcccgtcctcaggccagattgcactgcttgag
atggatgccaggctgcatgaggaccagctggagcaggtgctagaggctgctgcccaggcc
gcccgagatgtacataccctactggaccgtgtggtccggcagcacgtccaggaggcctct
atcttgctgggggactga
DBGET
integrated database retrieval system
