Phocoena sinus (vaquita): 116742550
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Entry
116742550 CDS
T07759
Symbol
DENND3
Name
(RefSeq) LOW QUALITY PROTEIN: DENN domain-containing protein 3
KO
K20162
DENN domain-containing protein 3
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116742550 (DENND3)
Membrane trafficking [BR:
psiu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116742550 (DENND3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
WDR55
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_LRRK2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
dDENN
uDENN
WD40
Beta-prop_WDR90_POC16_2nd
DUF5074
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Avl9
Motif
Other DBs
NCBI-GeneID:
116742550
NCBI-ProteinID:
XP_032466159
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All DBs
Position
17:76904265..76960864
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AA seq
1283 aa
AA seq
DB search
MAEPAPQYLALPSGLLELCALLGAPRDSLRGPEQVAQNKGVKSLSSLDPEVLSVFVPPFV
TKEDSQPAGVNCVTLGKTRRRSFRKKRERPKAEPSKGHPGGPRGQDPEDVGIPNGVDLLA
LPQLCFPGGVCVASEPKEDCVHFLVLTDVCGNRTYGVVAQYYRPLHDEYCFYNGKMRWEA
SGLGRSAAGCFVPFAVCVVSRFPYYNALKDCLSCLLTHLKICKDFEVDNHIKDFAAKLSL
IPSPPPGPLHLILNMKPLQIVFPSRADPESPLIDLDLHLPLLRFRPEKVLQILTCLLTEQ
HVVFFSSSWALLTLVAECFMAYLHPLQWQHTFVPILSRQMLDFVMAPTSFLMGCHLDHFE
EVSKEADGLILINIDTGSITYSNDEDVDVPDIPLLAAQTFIQRVQSLQMHRELDLAHLCA
STDLNEGRACRRAWQQRLNCQIQQITLQLLVCIFRGVKNHLNYEHRVFNSEEFLKTRAPG
DQQFYKQVLDTYMFHAFLKARLSRKMDAFAQMDLHTQSEEDRIDGMLLSPRRPTVEKMAS
RKSSAPHGAHRRMVVSMPNLQDITVPELPPRNSSLRKIRTEDCGSSHTVLDVPPKLTYTF
KIPEIHFPLVGQCVQAFHADCVAQLSKAMDSLAPENSVLLARYFYLRGLVQLMQGQLLGA
LLDFQSLYKTDVRIFPTDLVQRTVESLSAPERAQAERTPELRRLISAVVDKPKDAPKADD
RVKNFELPKKHMQLDDFVKRXQESGIVKDAGIIHRLFEALTVGHQKQIDPETFKDFYNCW
KEAEAEAQEVSLPFSVMEQLDKNECVYKLSSSVKTNRGVGXIAMTQKRLFLLTEGRPGYV
EISTFRNIEEVRSTTVAFLLLRIPTLKIKVVSKKEVFEANLKTECDLWHLMVKEMWAGKK
LADDHKDPQYVQQALTHVLLMDAVVGALQSPGAIYAASKLSYFDKMKNEMPMAVPKTTSE
TLKHKINPSAEETSPRAIDVLLYTPGHLDPAEKVEDAHPKLWCALNEGKVVVFDASSWTV
HQHCFKVGTSKLNCMVMAEQSQVWVGSEDSVIYIINVHSMSCNKQLTDHRSSVTGLVVQD
GVQAPSTVYSCSADGTVLAWNASSLRVTSRFQLPGDGLSAIRLHGGRLWCCTSNSIVVVT
TXGFLHQELKIGENFKEISTSFLGFQLMPEQEQLWAACAGYDDIYVWSLQDLAQPPQRIH
LQDCSKINCMIQVKKQQIWVGGTGLSQGRSKGKIYVIDAKRKTVEKELVAHTDTVKTLCS
AEDRYVLSGSGRDEGKIAIWKVE
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcccgccccgcagtacctggcgctgccctcggggttgctggagctgtgcgcg
ttgctgggggccccccgggacagcctccgtggccccgagcaggtcgcccagaataaggga
gtcaagagcctgtcttctctggatccggaggtcctgtcggtcttcgtgcctccgtttgtc
actaaggaggacagtcagccggccggcgtgaactgtgtgacgctgggtaagaccaggagg
cgctccttccggaagaagagagagaggcccaaggcggagccctcgaagggccaccccggc
ggccccaggggccaggaccccgaggacgtgggcatccccaacggcgtggacctgctcgcc
ctgccgcagctctgcttcccagggggcgtgtgtgtggcctctgagcccaaggaggactgt
gtccactttctggtgctgactgatgtctgcggcaatagaacctacggcgtggtggcccag
tactaccgacccctgcacgacgagtactgtttctacaacggcaagatgcgctgggaggcg
tcaggtctgggccggagcgcggccggctgcttcgtgccctttgccgtgtgtgtggtttcc
agattcccctattacaacgccctcaaggactgcctctcctgtttattgactcatctgaag
atctgtaaagatttcgaagttgacaaccatataaaagattttgctgcaaaactgtcttta
atacctagcccgcctcctggaccgctccatttgatattgaacatgaaaccactacagatc
gtatttccctcgagagcagaccccgaaagccccctcatcgacctggaccttcacctgccc
ttactgcgcttcagacctgagaaggtgctacagatcctaacgtgccttctgacggagcag
cacgtcgtgttcttctcgtccagctgggctctgctgacgctcgtggctgagtgcttcatg
gcctacctgcaccccctgcagtggcagcacaccttcgtccccatcctgtcgcggcagatg
ttggacttcgtcatggcgcccacgtcctttctcatgggctgccacctggaccactttgaa
gaagtcagcaaggaagccgatggtttaattctgataaacattgacactgggagcatcacc
tactctaacgatgaggacgttgacgttcctgacatccctctcctggcggcacagacgttt
attcagagggtccagagccttcagatgcaccgtgagctggacctcgctcacctctgcgcc
agcacagacctgaatgaggggcgagcctgccggcgggcctggcagcaacggcttaactgt
cagatccagcagatcaccctgcagctgctcgtctgcatcttcaggggagtgaagaatcac
ttaaattatgaacatagggtgttcaatagtgaagagtttctcaaaacaagagctccaggg
gaccagcagttttataaacaggtcttggacacctacatgtttcacgctttcctcaaggcc
cggctcagcagaaagatggacgcctttgcccagatggacctccacacgcagtccgaggag
gacaggatagacgggatgctcctgagtccaagaagacccacggtcgagaagatggccagc
cggaagtcctcagccccacacggggctcacaggcgcatggtggtcagcatgcccaacctg
caggacatcacggtgcccgagctgccgccccggaactcatcgctgcggaagatacgtacc
gaggattgcggaagcagccacacagttctggacgtgccccccaagttgacatacaccttc
aagatcccggaaatccactttccactggtgggccagtgtgtgcaggcattccacgcggac
tgcgtggcccagctgagcaaagccatggactcgctggcccccgagaactcggtgctgctg
gcgaggtacttctacctgcgagggctcgtccagctgatgcagggccagctgctgggcgcc
ctcctggacttccagagcctgtacaagacggatgtgcgcatctttcccaccgacctcgtc
cagaggacggtggagtccctgtcggcgcccgagcgcgcgcaggccgagcggacgcccgag
cttcgccggctcatcagtgcggtcgtggacaagcccaaggacgcccccaaggccgacgac
cgcgtgaagaacttcgagctgcccaagaagcacatgcagctggacgactttgtgaagagg
ntgcaggagtcgggcatcgtgaaggacgcgggcatcatacaccggctcttcgaggcatta
accgtgggacaccagaaacagattgacccagaaacattcaaagatttctacaactgctgg
aaggaggcagaagcagaggcccaagaggtcagcctgcctttttcggtgatggaacagctg
gacaaaaacgagtgtgtgtataagctgtcaagctccgtcaaaacaaatcgcggtgtgggc
nagatcgccatgacccagaagcgcctgttcctccttactgaggggaggccgggctacgtg
gagatttccaccttcagaaacatagaggaagtcagaagcaccacagtagcttttctgctc
ctgagaattcccactttaaaaatcaaagtggtgtccaagaaagaagtctttgaagctaat
cttaaaacagagtgtgacctgtggcacctgatggtgaaggagatgtgggctgggaagaag
ctggccgacgaccacaaggacccccagtacgtccagcaggcactgacccacgtcctgctg
atggacgccgtcgtcggtgcactgcaatcgcccggcgccatctacgcggcctccaagtta
tcttactttgataagatgaagaacgaaatgcccatggcagttccgaagacgacctcagag
accctgaagcacaagatcaacccttccgcagaagagacctccccacgcgccatcgatgtc
ctgctctacaccccagggcatcttgacccagcagaaaaagttgaggatgctcaccccaaa
ttatggtgcgctctgaacgaaggcaaggtggtcgtatttgatgcttcctcttggacggtt
caccagcactgctttaaagtgggcacttctaaactgaactgcatggtgatggcggagcaa
agccaggtgtgggtcggctcggaggactcggtcatctacatcatcaacgtccacagcatg
tcctgcaacaagcagctcacggaccaccgctccagcgtcacgggtctggtcgtgcaggat
ggagtgcaggcacccagcactgtgtactcgtgcagcgcggacgggacagtcctggcctgg
aacgcgagctccctgcgggtgaccagcaggttccagctgccgggcgacgggctctcggcc
atcagactgcacggcggccgcctctggtgctgtaccagtaacagtatcgtggtcgtgacc
acgnctggatttcttcatcaagaactgaagatcggcgagaactttaaagagataagcacc
tccttcctgggtttccagctcatgcccgagcaggagcagctctgggcggcctgtgccggg
tacgacgacatctacgtttggagcctgcaggacctcgcccagcccccgcagaggatccac
ctgcaggactgctccaagatcaactgcatgatccaggtgaagaagcagcagatctgggtg
ggcggcacagggctgtcgcaggggagatccaaggggaaaatctacgtgatcgatgccaag
aggaagacggtggagaaggagctggtggcccacacagacacggtgaagaccctgtgctcc
gcggaggacagatacgtgctgagcgggtccggccgcgacgagggcaagatcgccatctgg
aaggtcgagtaa
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integrated database retrieval system
