Phocoena sinus (vaquita): 116742565
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Entry
116742565 CDS
T07759
Symbol
GDF6
Name
(RefSeq) growth/differentiation factor 6
KO
K20012
growth differentiation factor 6
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04060
Cytokine-cytokine receptor interaction
psiu04350
TGF-beta signaling pathway
psiu04390
Hippo signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116742565 (GDF6)
04390 Hippo signaling pathway
116742565 (GDF6)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116742565 (GDF6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
psiu04052
]
116742565 (GDF6)
Cytokines and neuropeptides [BR:
psiu04052
]
Cytokines
Transforming growth factors (RSTK binding)
116742565 (GDF6)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
116742565
NCBI-ProteinID:
XP_032466178
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Position
17:complement(40135196..40151441)
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AA seq
462 aa
AA seq
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MDTPRVLLSAVFLISFLWDLPGFQQASISSSSSSTQLGSAKGMRSRKEGKMPRASRESAT
ARAPLGRQEPQPRPQEEPRRRPPQQPEAQEPPGRGPRVVPHEYMLSIYRTYSIAEKLGIN
ASFFQSSKSANTITSFVDRGLDDLSHTPLRRQKYLFDVSTLSDKEELVGAELRLFRQAPA
APWGPPARPLQVQLFPCLSPLLLDARTLDPQGAPRPGWEVFDVWQVLRHQPREQLCLELR
VAWGEQGAGEAEARAAPGLQQPPPPDLRSLGFGRRVRTPQERALLVVFTRSQRKNLFAEM
REQLGSAEVAGPGAGAEGSWPPPSGTPDAGSWLPSPGRRRRRTAFASRHGKRHGKKSRLR
CSKKPLHVNFKELGWDDWIIAPLEYEAYHCEGVCDFPLRSHLEPTNHAIIQTLMNSMDPG
STPPSCCVPTKLTPISILYIDAGNNVVYKQYEDMVVESCGCR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggatacccccagggtcctgctctcggccgtcttcctcatcagtttcctgtgggatttg
cccggtttccagcaagcttccatctcatcctcctcgtcgtccacccagctgggctccgcc
aagggaatgcgaagccgcaaggaagggaagatgccgcgggcgtcgcgagagagtgccacg
gcccgggcgcccctggggcggcaggagccacagccgaggccgcaggaggagccccggcgg
cggccgccacagcagcccgaggctcaggagcctccgggcaggggcccgcgcgtggtgccc
cacgagtacatgctgtcaatctacaggacttactccattgccgagaagttgggcatcaat
gccagctttttccagtcttctaagtcggctaatacgatcactagctttgtagacagggga
ctagacgatctctcgcacactcctctccggagacagaagtatttgtttgatgtgtccacg
ctctcagacaaagaagagctggtgggcgcggagctgcggctctttcgccaggcgcccgca
gcgccctgggggccgccggccaggccgctccaagtgcagctcttcccctgcctgtcgccc
ctgctgctggacgcgcggaccctggacccgcagggggcgccccggcccggctgggaagtc
ttcgacgtgtggcaggtcctgcgccaccaaccccgggagcagctgtgcttggagctgcgg
gtcgcgtggggcgagcagggagccggcgaggccgaggcgcgcgccgcgccggggctccag
cagccaccgcccccggacctgcggagtctgggcttcggccggagggtgcggaccccccag
gagcgcgccctgctcgtggtgttcacccgatcccagcgcaagaacctgttcgccgagatg
cgcgagcagctgggctcggccgaggttgcgggccctggcgcgggcgccgaggggtcgtgg
ccgccgccgtcgggcaccccagacgccgggtcttggctgccctcgcccggccgccggcgg
cggcgcacagctttcgccagccgccacggcaagcggcacggcaagaagtcgaggctgcgc
tgcagcaagaagcccctgcacgtgaacttcaaggagctgggctgggacgactggattatc
gcgcccctggagtacgaggcctaccactgcgaaggcgtgtgcgacttcccgttgcgctcg
cacctggagcccaccaaccacgccatcatccagacgctgatgaactccatggaccccggc
tctaccccgcccagctgctgcgtgcccaccaaactgactcccatcagcatcctgtacatc
gacgcgggcaataacgtggtctacaagcagtacgaggacatggtggtggagtcctgcggc
tgcaggtag
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