Phocoena sinus (vaquita): 116742595
Help
Entry
116742595 CDS
T07759
Symbol
LRRCC1
Name
(RefSeq) leucine-rich repeat and coiled-coil domain-containing protein 1 isoform X1
KO
K16475
leucine-rich repeat and coiled-coil domain-containing protein 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116742595 (LRRCC1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
116742595 (LRRCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_8
LRR_9
LRR_6
Motif
Other DBs
NCBI-GeneID:
116742595
NCBI-ProteinID:
XP_032466227
Ensembl:
ENSPSNG00000008058
LinkDB
All DBs
Position
17:28580353..28624205
Genome browser
AA seq
979 aa
AA seq
DB search
MEAPVEPEVENEDGESRCGDLCFMDKGLRSISELSLDSALRAINLHCNNISKIKAIDHIW
NLQHLDLSSNQISQIEGLNTLTKLRTLNLSCNLITRIEGLKALTNLTRLNLSYNHINDLS
GLMPLHGIKHKLRYIDLHSNCIDSIHHLLQCTVGLRFLTNLILEKNGEDNPVCHLPGYRA
VMLQTLPQLRILDCKNIFGEPVNMAEINSSRLQCFEGLLDNLVSSDSPLNISEDEIFDGM
PVVTPPINEVAPLDHFTSNSLIDNVPEKDLRPKRDTDVTSESDYGNRKECNRKIPRRSKI
PYYSKTIQTVKHHSKNNNAFISCNRKMKPPFFKELHVRSSLVNNNILEESEKQKTEIIKV
NNGSSENATYRALVEELDQEREKRWKAEQTEKKLMDYIDELHKHANEKKDIHSLALLTTD
RLKEIIFKERNSKLQLEIMVHNLQNEIKKLTIELIKARDQQEDHVRHLRTLEKALEKKER
QKGQQQAAQMRLIQEVELKAAAADREINLLRTSLHREKEQVQQLHELLALKEQEHRKDLE
TRKFFSEAEFQEALAKEIAKEERKHEQVIKEYQDKIDALNQQYMDLENEFRIALTVEARR
FKDVKDGFENVATELAKSKHALVWAQRKENESSSLIKDLTSMVKEQKTKLAEVSKLKQET
ATNLQNQINTLEILSEDDKKKSIQIELLKHEKMQLISELAAKESLIYGLRTERKVWGHEL
AQQGSSLAQNHGRLEAQIESLCRENESLRKASERDNDTLRIKCKIVEDQTETIGKLKKCL
QERDEQIKILHEKITEIQKCTQEQLDEKSSQLDEIIEKLERHNERKEKLKQQLKVKELEL
EEIRKAYSTLNQKWHDKGELLCHLEMQVKEVKENFENKERKLKAERDKSIELQKDAIEML
HSMDDAFKKQVDAIVEAHQAEIIQLASEKQKCIDSANLKVHQVEEEMRGLLEETCKNKKA
MEIKIKQLAFALNQIQQEM
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccggtggagccggaagtcgagaatgaggacggcgagagccgctgcggggat
ctgtgcttcatggacaaaggcctgcggagcatatcagagttatctttagattcagccctt
cgtgccatcaatcttcactgcaataacatctcgaagatcaaagccattgatcacatttgg
aatttacaacatctagatctgtcatctaatcaaataagtcaaattgaagggctaaacaca
ctgacaaaactacgtactttaaacttgtcctgcaatttgatcacaagaatagaaggactt
aaagcactaactaatctgactagactgaatttatcttataaccacataaatgatcttagt
ggtttgatgccccttcatggaattaaacataaacttagatatattgacctacatagtaat
tgtatagatagtatccatcacctacttcagtgtacggtaggattgcgcttcttgactaat
cttattttggagaaaaatggagaagataatcctgtctgtcatttgccagggtacagagca
gttatgctccagactttgccacagcttagaatcctagattgtaagaacatatttggtgaa
ccagtaaatatggcagaaataaactcatcacgcctacagtgctttgaaggtcttttggat
aatttagtttcttctgactctcccctaaatataagtgaagatgagatctttgatggtatg
ccagtggtaacaccacctatcaatgaggtagctcccttggatcactttacttctaattct
ttaatagataatgttcctgagaaagatctcagaccaaaaagagacacagatgtgacttct
gaaagtgactatggaaacagaaaagaatgcaatagaaaaattcctcgaagatcaaaaatc
ccatattattccaaaactattcaaactgttaagcaccacagtaaaaacaacaatgctttt
ataagttgtaatcgtaaaatgaaaccacctttctttaaagaattacacgtaagatcatct
ttagtgaacaataatatattagaagaatcagaaaagcagaagactgaaataattaaagta
aacaacggtagctcagaaaatgccacttaccgggcactagttgaggagctagatcaagag
agagagaagagatggaaagctgaacaaactgaaaagaaacttatggattatattgatgaa
ctgcataaacatgcaaatgaaaaaaaagatattcatagcctggctcttcttactacagat
aggctaaaggaaattatttttaaagagagaaattccaaactacaactcgaaattatggtt
cacaatcttcaaaatgaaattaaaaaactaactattgaattaattaaagcaagagatcaa
caagaggatcacgttagacacttaagaaccctggaaaaagcattagaaaaaaaggagaga
caaaaagggcaacagcaagcagcacagatgcgacttatccaagaggtggaactcaaagcc
gcagctgctgatagagaaataaacttacttagaacttctcttcatcgagaaaaggaacag
gtgcaacaacttcatgaacttcttgcattgaaagaacaagaacacaggaaagaccttgaa
acaaggaagttttttagtgaagctgagttccaggaagccttagctaaagaaattgctaaa
gaagagagaaaacatgaacaagttataaaagaataccaagacaaaattgatgcattaaac
caacagtatatggatttagaaaatgaattccgtattgctttaactgttgaagccagaaga
tttaaagatgttaaagatggttttgaaaatgttgcaactgaattagcaaagagcaagcat
gctcttgtttgggctcaacgaaaagaaaatgaatcttcctctttaattaaagatctaacc
agtatggtgaaggaacaaaaaacaaagctggcagaagtttctaaattgaaacaggaaaca
gcaacaaatttacagaatcaaatcaacacacttgaaattttaagtgaagatgacaagaag
aagagtattcaaatagaacttctcaagcatgaaaaaatgcagcttatttccgaactagca
gccaaggaatcgctaatttatggtttaagaacagaaagaaaagtatggggacatgagttg
gcacaacagggatcttctctagcccaaaatcatgggagactagaggctcaaattgaaagt
ttgtgtagggagaatgaatctctgcgaaaggcaagtgaacgtgataatgacacattaaga
attaagtgcaaaatcgtagaagaccaaactgaaaccattggaaaattaaaaaaatgttta
caggaaagagacgagcaaatcaaaatattacacgaaaagatcactgaaatacaaaaatgt
acccaagaacaacttgatgaaaaatcttcacaactggatgaaataattgagaaactagaa
agacacaatgaaaggaaagaaaaactaaaacagcagttgaaagtaaaggaattagaactt
gaagaaattagaaaagcttacagtacacttaatcagaagtggcatgataaaggagagctt
ctgtgtcatcttgaaatgcaagtaaaagaagtgaaagaaaactttgaaaacaaagaaagg
aaacttaaagcagaaagagacaaaagtattgaactgcaaaaggatgcaatagaaatgctt
catagtatggatgatgcatttaaaaaacaagttgatgcaattgttgaagctcatcaagct
gaaataatacaactggcaagtgaaaagcagaaatgtattgattctgcaaatttaaaggtt
catcaagttgaagaagaaatgcgtggacttctggaagaaacgtgcaagaacaaaaaagca
atggaaataaaaattaagcaacttgcttttgctctaaatcaaattcagcaagaaatgtga
DBGET
integrated database retrieval system
