Phocoena sinus (vaquita): 116742682
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Entry
116742682 CDS
T07759
Symbol
LRRC8C
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C
KO
K22038
volume-regulated anion channel
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116742682 (LRRC8C)
Ion channels [BR:
psiu04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
116742682 (LRRC8C)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_R13L1-DRL21
LRR_9
Motif
Other DBs
NCBI-GeneID:
116742682
NCBI-ProteinID:
XP_032466405
Ensembl:
ENSPSNG00000013297
UniProt:
A0A8C9C1I2
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Position
1:79775351..79868316
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AA seq
802 aa
AA seq
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MIPVTEFRQFSEQQPAFRVLKPWWDVFTDYLSVAMLMIGVFGCTLQVMQDKIICLPKRVQ
ASQNQSSVSNVSQAVASTTPLPPPKPSPTNPVTVEMKGLKTDLDLQQYSFINQMCYERAL
HWYAKYFPYLVLIHTLVFMLCSNFWFKFPGSSSKIEHFISILGKCFDSPWTTRALSEVSG
EDSEEKDNRKNVSRSNATPSGPEGGLVNSQSLKSIPEKFVVDKSTAGALDKKEGEQAKAL
FEKVKKFRLHVEEGDILYAMYVRQTVLKVIKFLIIIAYNSALVSKVQFTVDCNVDIQDMT
GYKNFSCNHTMAHLFSKLSFCYLCFVSIYGLTCLYTLYWLFYRSLREYSFEYVRQETGID
DIPDVKNDFAFMLHMIDQYDPLYSKRFAVFLSEVSENKLKQLNLNNEWTPDKLRQKLQTN
AHNRLELPLIMLSGLPDTVFEITELQSLKLEIIKNVMIPATIAQLDNLQELSLHQCSVKI
HSAALSFLKENLKVLSVKFDDMRELPPWMYGLRNLEELYLVGSLSHDIYKNITLESLRDL
KSLKILSIKSNVSKIPQAVVDVSSHLQKMCIHNDGTKLVMLNNLKKMTNLTELELVHCDL
ERIPHAVFSLLSLQELDLKENNLKSIEEIVSFQHLRKLTVLKLWYNSITYIPEHIKKLTS
LERLFFSHNKIEVLPSHLFLCNKIRYLDLSYNDIRFIPPEIGVLQSLQYFSITCNKVESL
PDELYFCKKLKTLKIGKNSLSVLSPKIGNLLFLSYLDVKGNHFEILPPELGDCRALKRAG
LVVEDALFETLPSDVREQMKTE
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgattccggtgacagagttccggcagttctctgagcagcagcctgccttccgggttctg
aagccatggtgggatgtatttaccgactacttgtccgtggccatgctgatgatcggtgtg
ttcggatgcactctgcaggtcatgcaagacaagataatctgccttccaaagagagtgcag
gcttctcagaaccagtcttccgtttcgaatgtctctcaagcagtggccagtaccaccccc
ctgcctccaccgaaaccgtctcccactaacccagtcactgtggaaatgaaaggactgaag
acagatttggaccttcagcagtacagcttcattaaccagatgtgctatgagcgagccctc
cactggtacgccaagtatttcccttaccttgtcctcatccataccctggtcttcatgctc
tgtagcaacttttggttcaaattccctggttccagctccaaaatagaacatttcatctca
atcctggggaagtgttttgactctccctggaccacacgggctttatctgaagtgtctggg
gaggactcagaagaaaaggacaacaggaagaacgtgagcaggtccaacgccaccccgtct
ggtccggaaggcggcctggtcaactctcagtctttaaagtcaattcctgagaagtttgtg
gttgacaaatccactgcaggggctctagataagaaggagggtgagcaagcgaaggcttta
tttgagaaggtgaagaagttcaggctgcacgtagaagaaggtgatatattatacgctatg
tatgttcgtcagactgtacttaaggttataaaattcctaatcatcattgcatataatagc
gccctggtttccaaagtccaatttacagtggactgcaatgttgacattcaggacatgact
ggatataagaacttttcctgcaatcacaccatggcacacttgttctcgaaactctccttt
tgctacttgtgctttgtaagtatctacggattgacgtgcctttataccttatactggctg
ttctaccgttctctgagggagtactcttttgagtacgtccggcaggaaactggaattgat
gatattccagacgtgaaaaatgactttgcttttatgcttcatatgatagatcagtacgac
cctctgtattccaagagatttgcagtgttcctatctgaagtgagtgaaaacaaattaaag
cagctgaacttaaacaacgagtggactccggataaactgaggcagaagctgcagacgaat
gcccataaccgcctggaattgcctctcatcatgctctctggccttccagacactgttttt
gaaatcacggagttgcagtctctaaaacttgaaatcattaagaatgtcatgataccagcc
accattgcacagctagacaatctccaggagctctctctgcaccagtgctcggtcaaaatc
cacagcgcggcgctctccttcctgaaggagaacctcaaggtcttgagcgtcaagtttgat
gatatgagggagctgcccccctggatgtatggcctccggaacctggaggagctctacctg
gttggctctctaagtcacgatatttacaaaaatatcacccttgagtctctgcgggatctc
aaaagccttaaaattctctctatcaaaagcaatgtttccaaaatcccacaggcagtggtt
gatgtttccagccatctccagaagatgtgcatacacaacgatggcaccaagctggtgatg
cttaacaatctgaagaagatgaccaatctgacagagctggagctggtccactgtgacctg
gagcgcattcctcacgccgtgttcagcctgcttagcctccaggaattggacctcaaggaa
aataatctgaagtctatagaagagatcgttagcttccagcacttgagaaagttgacagtg
ctaaaactgtggtataacagcatcacctacatcccagagcatataaagaaactcaccagc
ctggagcgcctcttctttagtcacaataaaatagaggtgctgccttcccatctcttccta
tgcaacaagatccgatacctggacttgtcctacaatgacattagatttatcccgcctgag
atcggagttctacaaagtttacagtatttttccatcacttgtaacaaagtggagagcctt
ccagatgaactctatttctgtaagaaactcaaaactctgaagattgggaaaaacagccta
tcagtactttcaccaaaaattggaaatttactatttctctcctatttagatgtcaaaggc
aatcactttgaaattctccctcccgaactgggcgactgtcgggctctgaagcgagctggt
ttagttgtagaagatgctctgtttgaaaccctgccttctgatgtccgggagcaaatgaaa
acagaataa
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