Phocoena sinus (vaquita): 116742986
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Entry
116742986 CDS
T07759
Symbol
LCP1
Name
(RefSeq) plastin-2
KO
K17276
plastin-2
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psiu04812
]
116742986 (LCP1)
04147 Exosome [BR:
psiu04147
]
116742986 (LCP1)
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
116742986 (LCP1)
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of microglial cells
116742986 (LCP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_8
CAMSAP_CH
DUF7460
Motif
Other DBs
NCBI-GeneID:
116742986
NCBI-ProteinID:
XP_032466825
Ensembl:
ENSPSNG00000012692
UniProt:
A0A8C9BZ43
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Position
18:20822708..20879851
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AA seq
627 aa
AA seq
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MARGSVSDEEMMELREAFAKVDSDGNGYISCNELNDLFKAACLPLPGYRVREIIENLMAT
GDLDQDGKISFDEFIKVFHGLKSTDVAKTFRKAINKKEGLCAIGGTSEQSSVGTQHSYSE
EEKYAFVNWINIALESDPDCRHVIPMNPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI
NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI
ELSRNEALAALLREGESLEDMMKLSPEELLLRWANYHLENAGCSKISNFSSDIKDSKAYY
HLLEQVAPKGEEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTATDVVRGNP
KLNLAFIANLFNRYPALHKPENQDIDWGALEGETREERTFRNWMNSLGVSPRVNHLYSDL
SDALVIFQLYEKIKVPVDWNRVNKPPYPKLGGNMKKLENCNYAVELGKNQAKFSLVGIGG
QDLNEGNRTLTLALVWQLMRRYTLNILEELGGGQKVNDDTIVNWVNETLKEAEKSSSISS
FKDPKISTSLPVLDLIDAIQPGSINYDLLKTENLNDEEKLNNAKYAISMARKIGARVYAL
PEDLVEVNPKMVMTVFACLMGKGMKRV
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggccagaggatcggtatcagatgaagaaatgatggagctcagagaagcttttgccaaa
gttgattctgatggcaatgggtacatcagctgcaatgagctgaatgatttgttcaaggct
gcctgcttgcctctgcctgggtacagagtgagagaaattatagaaaacctgatggctaca
ggtgacctggaccaggatgggaagatcagctttgatgagtttatcaaggtttttcatggc
ctgaaaagcacagacgttgccaagacctttagaaaagcaatcaacaagaaggaaggcctt
tgtgcgatcgggggcacttcagagcaatctagtgttgggacccagcactcctattcagag
gaagagaagtatgcctttgtcaactggataaacatagccctggaaagtgaccccgattgt
cggcacgtcatcccaatgaatccaaacaccaatgatctcttcagtgctgttggagatggc
attgtgctttgtaaaatgatcaacctgtcagtgccggacacaattgatgaaagaacaata
aacaaaaagaaactcacccctttcaccattcaggagaatctgaacctggctctgaactct
gcctcagccatcggctgccacgtggttaatatcggggctgaggacttaaaggaggggaag
ccttacctggtcctgggactgctgtggcaggtcatcaagattgggttatttgccgacatt
gaactcagcagaaacgaagcactggctgctcttttgagagagggggagagtctggaggat
atgatgaaactctcccctgaggagctcctgctgagatgggctaattaccacctggaaaac
gcaggctgcagcaaaatcagcaacttcagcagtgacatcaaggactcaaaagcttattac
cacctgcttgaacaggtggctccaaaaggagaagaagaaggtattcctgctgttgttatt
gacatgtcaggactgagggagaaggatgacatccagagggcagaatgcatgttgcagcag
gcggagaggctgggctgccggcagtttgtcacagctacagatgttgtccgagggaacccc
aagttgaacttggcttttattgccaacctctttaacagataccctgccctgcacaaacca
gagaaccaggacatcgactggggggcccttgaaggtgagacaagagaagagcggacattt
aggaactggatgaactccttgggtgtaagccctcgagtcaatcatttgtacagtgactta
tcagatgccctggtcatcttccagctctatgaaaagattaaagtccctgttgattggaac
agagtaaacaaaccaccataccccaaactggggggcaatatgaagaagcttgagaactgt
aactatgcagtggaactggggaagaatcaagcgaaattctccctggtgggcattggggga
caagatctcaatgaaggaaaccgcactctgacattggccttggtttggcagttaatgaga
aggtacacactgaatattcttgaagaacttggaggtgggcagaaggtcaacgatgacact
attgtcaactgggtgaatgaaacattgaaggaagcggagaaaagttcatccatctctagt
ttcaaggacccaaagattagtacaagtctgcccgtcctggatctcattgatgccattcaa
ccaggttccattaactatgacctcctgaagacagaaaacctgaacgatgaagagaaactc
aacaatgcaaagtatgccatctctatggcccgcaaaattggagcacgagtatatgccctt
ccagaagacttggtggaagtgaaccccaagatggtcatgacagtgtttgcttgcctcatg
gggaaaggaatgaagagggtataa
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