Phocoena sinus (vaquita): 116743101
Help
Entry
116743101 CDS
T07759
Symbol
SOX21
Name
(RefSeq) transcription factor SOX-21 isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116743101 (SOX21)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116743101 (SOX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116743101
NCBI-ProteinID:
XP_032467220
Ensembl:
ENSPSNG00000019784
UniProt:
A0A8C9CLX6
LinkDB
All DBs
Position
18:complement(64640004..64642911)
Genome browser
AA seq
276 aa
AA seq
DB search
MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGVTDAEHPALKAGAGLHAG
AGGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAAGSPYSLLDLGSKMA
EISSSSSGLPYASSLGYPTAGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYMIPCNC
SAWPSPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggtggaccacgtcaagcggcccatgaatgccttcatggtctggtcgcgg
gctcagcggcgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaag
cgcctgggcgccgagtggaagctgctcaccgaatcggagaagcggccgttcatcgacgag
gcgaagcgcctgcgcgccatgcacatgaaggaacacccagactacaagtaccggccgagg
cgcaagcccaagacgctgctcaagaaggacaagttcgccttccctgtgccctacggcctg
ggcggcgtgaccgacgccgagcacccggcactcaaggcgggcgccgggctgcacgcaggc
gcgggtggcggcctggtgcccgagtcgctgctcgccaaccccgagaaggcggccgccgcc
gccgccgcggctgccgcccgcgtcttcttcccgcagtcggccgccgccgccgccgcagcc
gccgccgccgccgccgccggcagcccctactcgctgctcgacctgggctccaagatggca
gagatctcgtcctcctcgtccggcctcccgtacgcgtcgtcgctgggctacccgaccgcg
ggcgcgggcgccttccacggcgcggcggcggcggctgcagcagcggcggcggccgccggg
gggcacacgcactcgcaccccagcccgggcaacccgggctatatgatcccgtgcaactgc
agcgcgtggcccagccccgggttgcagccgccgctcgcctacatcctactgcccggcatg
ggcaagcctcaactggacccctaccctgcggcctacgccgctgcgctatga
DBGET
integrated database retrieval system
