Phocoena sinus (vaquita): 116743108
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Entry
116743108 CDS
T07759
Symbol
SLITRK6
Name
(RefSeq) LOW QUALITY PROTEIN: SLIT and NTRK-like protein 6
KO
K25837
SLIT and NTRK-like protein 6
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116743108 (SLITRK6)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LapA_dom
LRRCT_2
LRRCT
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
116743108
NCBI-ProteinID:
XP_032467243
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Position
18:complement(58005958..58012417)
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AA seq
842 aa
AA seq
DB search
MKLWSHLLYSSLLACLSSQSQSPMSSASARGSCDSLCNCEEKDSTMLINCEEKGIKKLSQ
ISVPPSQPFHLSLVNNGLTMLHTNDFSGLTNAISIHLGFNNIADIETGAFNGLGLLKQLH
INHNSLEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESFPPN
IFRFVPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNKWACNCDLLQLKLWLENMPP
QSIIGDIVCNSPPFFKGSILSRLKKESICSTPPVFEEHEDPSGSLHLAVTSSISDGRMST
KTTSLLKPPTKAPGLIPYITKPFTQLPGLYCPIPCNCKVLSPSGLLIHCQERNIESLSDL
KPPPQNPRKLILAGNIIHTLMKSDLVEYFTLEMLHLGNNRIEVLEEGSFVNLTRLQKLYL
NGNHLTKLSGGMFLGLHNLEYLYLEYNGVKEILPGSFNPMPKLKVLYLNNNLLQVLPPHI
FSGVPLMRVNLKTNQFTHLPVSNILDDLDLLTQIDLEDNPWDCSCDLVGLQQWIQKLSKN
TVTDEILCTSPEHLDKKELRALNSELLCPGLVNNPSLPTQTSYVMVNTPTATTTADTIFK
SLTDAIPLSVLILGLLIVFITIVFCAAGIVVLVLHRRRRYKKKQADEQMRDNSPVHLQYS
MYGHKTTHHTTERPTASLYEQHMVSPVVHVYRSPSFGSKHLEEEEERNEKEGSDAKHLQR
SLLERENHSPLTGSNMKYKVTDQSTEFLSFQDASSLYRNILERERELQQLGITEYLRKNI
AQLQPDMEVHYPGAHEELKLMETLMYSRPRKVLVEQTKNEYFELKANLHAEPDYLEVLEQ
QT
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgaaactttggagtcacctcttgtattcatctctccttgcctgtttatcgtcacagtcc
caatcaccaatgtcctctgcctcagccagaggttcttgtgactctctttgcaattgtgag
gaaaaagacagcacgatgctaataaattgtgaagagaaaggtatcaagaagttatcccaa
ataagcgtgccaccatcacaacctttccacttaagtttagtaaataatggtttgacaatg
cttcacacaaatgacttttctgggcttaccaatgctatctcaatacaccttggatttaac
aatattgcagatattgagactggtgcatttaatggccttggccttcttaagcaacttcat
atcaatcacaattctttagaaattcttaaagaggatactttccatggactggaaaacctg
gaattcctacaagcagataacaattttattacagtgattgaaccaagtgcctttagcaag
ctcaacagacttaaagtgttaattttaaatgacaatgctattgagagttttcctccaaac
atatttcgatttgttcctttaacccatctagatcttcgtggaaatcagttgcaaacattg
ccttatgttggttttttagaacacattggcagaatattggatctccagttggaggacaat
aaatgggcctgcaattgtgacttattacagctaaaactttggttggaaaacatgccccct
cagtctataattggtgatattgtgtgcaacagccctccatttttcaaaggaagcatactg
agccggctgaaaaaggaatcaatttgctccactccaccagtgtttgaagaacacgaggat
ccttcaggatcattacatctggcagtaacatcttcaataagtgatggtcgcatgtcaacc
aagaccacgtctcttttaaaaccacccaccaaagcaccaggtttaataccttatattaca
aagccattcactcaacttccaggactctactgtcctattccttgtaactgcaaagtactc
tccccatcaggacttctaatacactgtcaagagcgcaatattgaaagcttatcagatcta
aaacctcctccacaaaatcctagaaagcttattcttgcaggaaatattattcatacctta
atgaagtctgatctagtggaatacttcactttggaaatgcttcacttgggaaacaatcgt
attgaggttctcgaagaaggatcgtttgtgaatttaacaagattacaaaagctctatctg
aatggtaaccatctgactaaattaagtggaggcatgttccttggtctccacaatcttgag
tacttatatcttgaatacaatggcgttaaggaaatattacctggtagcttcaacccaatg
cctaaacttaaagtcctctatttaaacaacaacctcctgcaagttttaccaccacatatt
ttttcaggggttccacttatgagggtaaaccttaaaacaaaccaatttacccatctacct
gtaagtaatatcttggatgaccttgatttactgactcagattgaccttgaggacaacccc
tgggattgttcctgtgacctggttggattgcagcaatggatacaaaaattgagtaagaac
acagtgacagatgaaatactctgcacctctccagagcacctagacaaaaaagaattgaga
gcacttaacagtgaacttctttgcccaggtttggtcaataacccatccttgccaactcag
actagttacgtaatggtcaatactcctacagccacaactacagcggacactatttttaaa
tcacttaccgatgctataccactatctgttttaatactaggactgctgattgtattcata
actatcgtgttctgtgctgcagggatagtggttcttgttctccaccgtaggagaagatac
aaaaagaaacaagctgatgaacagatgagagacaacagtcctgtgcatctccagtatagc
atgtacggccataaaacaactcaccacactactgagagacccacagcatcactctatgag
cagcacatggtgagccctgtggttcatgtctatagaagcccatcctttggctcaaagcat
ctggaagaagaagaagaaaggaatgagaaagagggaagtgatgcaaaacatctccaaaga
agtctcttagaacgagaaaatcattccccactcacaggatcaaatatgaagtacaaagtc
acagaccaatccactgaatttttatccttccaggatgccagttcgttatataggaacatt
ttagagagagaaagagaacttcagcaactgggaatcacagaatacctaaggaaaaacatt
gctcaacttcagcctgatatggaggtacattatccaggagcccatgaagagttaaagttg
atggagacattaatgtactcaagaccgaggaaggtattagtggaacagactaaaaatgag
tattttgagctgaaagctaacttacatgctgaacctgactacttagaagtcctggagcag
caaacatag
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