Phocoena sinus (vaquita): 116743185
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Entry
116743185 CDS
T07759
Name
(RefSeq) protein transport protein Sec16B-like
KO
K20353
COPII coat assembly protein SEC16
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116743185
Membrane trafficking [BR:
psiu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116743185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
116743185
NCBI-ProteinID:
XP_032467396
Ensembl:
ENSPSNG00000000203
LinkDB
All DBs
Position
1:complement(134375400..134471947)
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AA seq
1066 aa
AA seq
DB search
MKPWVPQWPPQPAGRPPSTSRDPDRGLQRDRYYRPIRHSWHNGERVQQEQDMGRSPQPQQ
DPGEDHQQPHYASRPGEWHPPVSRVDYYKGGYPSQLYSRPGIEDLYQSYHSPALREEYAY
GSYYYHGHPQQLREEGVPRQGSPYTWHEDYRDQKYLNEHQHENQNSPFGTNSETQFQSKR
WNPYKDSPASNSGQERPGDLFVESPLTGAQKNKPSLTEESNLLRQHESGLTSSSYELSQY
MTDASELYDPMAAAGWSPVQAEDISAAGPKTPMKFYIPHVPVSFGPGGQLVCVGPRSLSD
GQTALVELHSMEVILNDSEEQEKMRTFSGPLIREDVHKVDIVTFCQQKAAQSRKSETPGS
RDSALLWQLLVLLCRQNGSVVGSDIAELLVQDCKKLEKYKRQPPVANLINLTDEDWPVLS
LGTRNLLTGEVPPSVETPAQIVEKFTKLLYYGRKKEALEWAMKNHLWGHALFLASKMDPR
TYSWVMSGFTSTLALNDPLQTLFQLMSGRIPQAATCCGDEQWGDWRPHLAVILSNQGGDP
ELYQRTIVTMGDTLAGKGLVEAAHFCYLMAHVPFGSYTVKTDHLALLGSSHSQEFLKFAT
TEAIQRTEIFEYCQMLGRPKSFIPSFQVYKLLYASRLADYGLASQALHYCEAIGTALLSQ
GENSHPVLLVELIKLAERLKLSDPLVLERHRRHRGDRDLEPDWLVHLRGHHKELQQKVAG
DIGDPCSAHSDILGARKTTDDTFYQDLSGHQGNSEALGDCSALWPTLEPMGPAQPSPQQP
FPLQPSSYPAGGGSGQTGVPVPLYSVPEAHLPGTGGSVAVTGTPGGRAWEEAQQMHPPPG
ENTVSPETFQQPDRQKVVSKPQVPLIPRARNISESSTVSVKEDDGESSDEAEKKKSSENT
AQRGKLGDAKENTKGSGFGWLSWFRPKPAGDAPPSGDEDAPDSPDSEQEAPGASAPPGPS
PGLSPTPPPAPQSLPDAGAFSRDTGGSEARGSASGAGRAEGTGNGGLLGPQGVSSGLYFN
PGVLLPPPTLKGAVPLYNPSQVPQLSMATSLNRPNRLAQRRYPTQQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgaagccttgggttccccagtggccgcctcagccagcggggaggcccccatcaacatca
agggatccagaccgagggcttcagagagatagatactatcggcctattcgtcactcttgg
cacaatggagagagggtccaacaagaacaagacatgggcaggagcccccaaccacagcag
gaccctggggaagaccaccagcagcctcactacgcgtccaggcctggggaatggcatccg
cctgtgtccagggttgactattataaaggtggttatcccagtcagttgtattcaaggccg
ggcattgaggatctctatcaaagctatcactctccagccctaagggaagaatatgcttat
ggaagttattactaccatggacacccgcagcagctgcgggaagaaggagtgccaaggcaa
gggagtccttatacctggcatgaagattatcgagatcaaaagtacctgaatgaacaccaa
catgaaaaccagaatagtccgtttggaacaaatagtgagacccagttccaatctaagcgt
tggaacccttataaagacagtcccgcttctaactctggacaggagaggcctggggactta
tttgtggagagtccgctaactggggcccagaaaaacaagccatcactgaccgaggaatcc
aaccttctccggcagcacgagtctggtctcacctccagcagctatgagctcagtcagtac
atgacagacgcctctgagctgtacgaccccatggctgcagcgggttggagtccagttcag
gctgaggacatctcggcagctggtcccaagacacccatgaagttctacatccctcacgtg
cctgtgagttttgggccaggaggtcagctggtgtgtgtgggtcccagatctctcagtgat
ggacagacggcccttgttgaactgcacagcatggaggttattcttaatgattctgaggaa
caagaaaagatgaggactttctcaggacccctgattagggaagatgtacacaaggtggac
atcgtgacgttttgccagcagaaagcagcgcagagtcgcaaatctgagacaccagggagc
agagactcggctctactgtggcaactgttggttctcctttgtcggcagaacgggtccgtg
gtggggtctgacatcgcggagctgctggtgcaggactgcaagaagctggagaagtacaag
cggcagccgcctgtggccaacctcatcaacctgacggatgaggactggccagtactgagc
ttagggacccggaacctgctcactggggaggttccccccagcgtggagacgcctgcgcag
atcgtggagaaattcactaagttgctctactacggaaggaaaaaggaagccttggagtgg
gccatgaagaaccatttgtggggtcatgctttgttccttgccagcaagatggacccaagg
acctacagctgggtcatgagtggcttcaccagcacgctggcgctcaacgacccactgcag
accctcttccagctcatgtccggaaggatcccacaggcagccacgtgttgtggggacgag
cagtggggagactggagaccgcacttggctgtgattctgtcgaatcaaggtggggacccg
gagctgtatcagcgcacgattgtcaccatgggggacaccctggctgggaaggggctggtg
gaagcagctcacttctgctacctcatggctcacgtgcccttcggctcctataccgtgaag
acagaccacctggccttgctgggcagtagccacagtcaagagtttttgaaatttgcaaca
actgaggctatccagaggacggaaatcttcgagtactgtcagatgctgggccgccccaaa
tccttcatcccttctttccaggtgtataagctcctttatgcttcccgtctggcagattac
ggccttgcgtcccaggccttgcattactgcgaagccattggcacagccctcttgagccag
ggagagaacagtcaccctgtgctactagtggaactcatcaagcttgcagagagactgaag
ctgtcagatcctctggttttagaacgccaccgccgtcaccgaggagacagggacctggag
ccggactggctggtacaccttcgggggcatcacaaggagctgcagcaaaaggtagcagga
gacattggggatccttgctctgctcactcggatattttgggagccagaaaaacaacagac
gacactttctaccaggatctttctggacatcaaggcaactcagaagcccttggggactgc
tcagccctgtggccaacactggagccgatgggcccggcccagcccagcccacagcagccc
tttcccctccagcccagctcctacccagcaggaggaggttccgggcagacgggggtcccg
gtgcctctttactcagttcctgaggcccatctgccagggaccggtggcagtgtggcagtg
acagggactcctggaggaagggcctgggaggaagcccagcagatgcacccgccccccgga
gagaacacagtgtctccagaaaccttccagcaacctgacaggcagaaggttgtttccaaa
ccgcaggtgccactgattcccagagcacgaaatatttctgagagttccactgtatcagtc
aaggaggatgacggggagtcctccgatgaggcagagaagaaaaagtcttccgaaaacacc
gcccagagaggaaagctcggagacgcgaaggagaatacaaagggctcggggtttggctgg
ctcagctggtttcgcccgaagcccgccggcgacgcgcccccctctggagatgaggacgca
cctgacagtcctgactctgagcaggaagcccccggagcatctgctcctcccgggcccagc
ccgggcctctccccgacgccgcccccagctccccagtctctgccggacgccggcgccttc
tccagggacacaggtggcagtgaagcccgaggatcagcgtccggggcagggagagccgag
ggcacggggaatggaggcttgttgggacctcagggtgtttcctctgggctctacttcaac
cctggtgttctgcttcccccacccaccttgaaaggggctgtccctctctacaatccatcc
caggtcccccagctctccatggctaccagcctgaaccggccaaatcgcctagctcagcgc
cgctatccaacccagcagtga
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integrated database retrieval system
