Phocoena sinus (vaquita): 116743186
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Entry
116743186 CDS
T07759
Symbol
CDX2
Name
(RefSeq) homeobox protein CDX-2
KO
K22234
homeobox protein CDX2
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09160 Human Diseases
09162 Cancer: specific types
05226 Gastric cancer
116743186 (CDX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116743186 (CDX2)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
116743186 (CDX2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
116743186
NCBI-ProteinID:
XP_032467392
Ensembl:
ENSPSNG00000009587
UniProt:
A0A8C9BXN5
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Position
18:complement(5390808..5397167)
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AA seq
303 aa
AA seq
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MYVSYLLDKDVSMYPSSVRHSGGLNLAPQNFVSPPQYPDYGGYHVAAAAAANLDSAQSPG
PSWPPAYGAPLREDWNGYAPGGAAAAANAVAHGLNGGSPAAAMGYSSPADYHPHHHPHHH
PHHPAAAPSCASGLLQTLNPGPPGPAVTAAAEQLSPGGQRRNLCEWMRKPAQPSLGSQVK
TRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKER
KINKKKLQQPPTSQPQAPQPQPGPLRSVPEPLSPVSSLQGSVPGPVPGVLGPTGGVLNPT
VTQ
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagctacctcctggacaaggacgtgagcatgtatcccagctccgtgcgccac
tccggcggcctcaacctggccccgcagaacttcgtcagccccccgcagtacccggactac
ggcggctaccatgtggccgccgccgccgccgcgaacttggacagcgcgcagtccccggga
ccgtcctggccgcccgcgtacggcgccccgctccgcgaggactggaacggctacgcgccg
gggggcgcggcggccgccgccaacgccgtggcccacggtctcaacgggggctccccggcc
gccgccatgggctacagcagccccgccgactaccacccgcaccaccatccgcaccaccac
ccgcaccacccggccgccgcgccctcctgcgcctcgggcttgctgcagacgctcaacccc
ggcccccccgggcccgccgtcaccgccgccgccgagcagttgtcccccggcggccagcgg
cggaacctgtgcgagtggatgcggaagcccgcgcagccgtcgctcggcagccaagtgaaa
accaggacgaaagacaaataccgagtcgtgtacacggaccaccagcgtttggagctggag
aaggagtttcactacagtcgctacatcaccatccggcggaaagccgagctggccgccacg
ctggggctctccgagaggcaggttaaaatttggtttcagaaccgcagagcaaaggaaagg
aagatcaacaagaaaaagctgcagcagccgccaacgtcccagccacaggctccccagccg
cagccaggtcccctgagaagtgtcccggagcccctgagtcccgtgtcttccctgcagggc
tcggtgcctggtcctgtccctggggttctggggccgactgggggggtgttaaaccccact
gtcacccagtga
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