Phocoena sinus (vaquita): 116743219
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Entry
116743219 CDS
T07759
Symbol
MCF2L
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116743219 (MCF2L)
Membrane trafficking [BR:
psiu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116743219 (MCF2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
Spectrin
SH3_1
DUF7799
PH_10
Motif
Other DBs
NCBI-GeneID:
116743219
NCBI-ProteinID:
XP_032467447
Ensembl:
ENSPSNG00000018842
LinkDB
All DBs
Position
18:78966801..79090136
Genome browser
AA seq
1211 aa
AA seq
DB search
MPGCWRFIPCKDAGGDGGPRARGPSEAKEEESDPRVDVSDVIRLVQDQPGGTPTPADEIM
HYDVSPLRAADIQDQLQKRFAYLSGGRGQDGSPVITFPDYPAFGDVPDKEFQNVMTYLTS
IPSLQDAGIGFILVIDRRQDKWTSVKASILRIAASFPANLQLVLVLRPTGFFQRTLSDLA
FRFNRDDFKMKVPVIMLSSVPELHSYIDKSQLTEDLGGTLDYCHSRWLCRRTAIESFALL
VKQTAQVLQAFGTELAETELPNDVQSTSSVLRAHTEKKDRAKEDMRLALDEGRSVLESIR
EPLGRGPEQSPNQDQLDSQSTVQRLLAQLSETEAAFDEFWAKHQRKLEQCLQLRHFEQDF
REVKAALDVLAQKIATFTDVGNSLAHVEHLLKDLASFEEKSSAVTQRARTLALEGERLIE
LKHYAVDSIRPKCHELHQLCDQFAADVGRRRGLLGRALDLHGLLEASMKWCDEGIYLLAS
QPVDKCQAQDGAEAALQEVEKFLETRAENKIQELSKIYQDYEPILTRDLLEHVQKVFRKQ
ESVEEMFHRRQASLKKLAAKQTRPVQPVAPRPEAPAKSPCPSPGIRRGSEIHSSEGSVLR
RGPYRRARSEVSEGRQGRGRSTGDEESLAVLRRHVMNELLDTERVYVEELLCILEGYAAE
MDNPLMTHLISTGLQNKKDVLFGNMEEIYHFHNRIFLRELENYIDCPELVGRCFLERMEQ
FQVYEKYCQNKPRSESLWRQCSDCPFFQECQKKLDHKLSLDSYLLKPVQRITKYQLLLKE
MLKYSKSCEGAEDLQEALSSILGILKAVNDSMHLIAITGYEGNLSDLGKLLMQGSFSVWT
DHKKGHAKVKDLARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSFKQSLNMTAVG
ITENVKGDAKKFEIWYNAREEVYIVQAPTPEIKAAWVSEIRKVLTSQLQACREASQHRAL
EQSHSLPLPAPAGTSPSKGNTKDVRKLEERKTDPLNLEGYVGPAPLPRPPEKDRDDAVTS
STSESSALSKKRFTLQSFAALKGQKASPTSPDKKAKRHQVKSDPTPFGLRGWSKTSNPPE
APEDNDGWSSAEEPVNSSDAEEEGRAGLRKLVPGKYTVTGLDEKGGPDALVLRSGDEVEL
VQEGDEGLWFVRNVSSGGEGWLPARNLSALLGQRGAPGCLSSPESSAGSALLSASSSCSE
SCAAALADLQG
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgcccggctgttggaggttcatcccgtgcaaggatgctggaggtgacggtggtcctcgc
gcgcgagggcccagtgaggccaaagaggaggaaagtgaccctcgggtcgatgtgtctgac
gtcatcaggctcgttcaagaccagccgggggggacgcccacacccgcagatgagatcatg
cactacgacgtcagcccgctccgtgctgccgacatccaggaccagctgcagaagcgcttt
gcgtacctgtctggtgggcgggggcaggacggcagccccgtcatcaccttccccgactac
ccggccttcggcgacgtccccgacaaggagttccagaatgtcatgacctatctcaccagc
atccccagcctgcaggatgctggcatcgggttcatcctggtcatagaccgcaggcaggac
aaatggacctcggtcaaggcgtccatcctgagaatagcggcgtccttcccggcaaacctc
cagcttgtcctcgtcctgcgcccaacgggatttttccaaaggacgctctctgacctcgcc
ttcaggttcaacagagatgactttaagatgaaggtaccggtcataatgctgagctccgtc
ccggaattacacagttacattgacaagtcccagctgaccgaggacctgggcgggacgctg
gattactgccactccaggtggctctgccgccgcacagcgatagagagcttcgccctcctg
gttaagcagacagctcaggtgctgcaggccttcgggaccgagctggccgagacggagctg
cccaacgacgtacagtccacgagctccgtgctccgtgcccacacggagaagaaggacagg
gccaaggaggacatgaggctggcgctggacgaggggcggagcgtcctggagagcatccgg
gagccgctgggccggggcccggagcagagcccgaaccaggaccagctggacagtcagagc
accgtgcagaggctcctggcccagctgagtgaaaccgaggccgcctttgatgagttttgg
gcaaaacatcagcgaaaactagagcagtgcctgcagctccggcacttcgagcaggacttc
cgagaggtcaaagccgccttggacgtgttggcccagaagatcgcgaccttcaccgacgtg
ggaaacagcctggcgcatgtggagcacctcctgaaggacctcgccagcttcgaggagaag
tccagtgcggtcacgcagcgggcccgcaccctggccctggagggtgagcggctcatcgag
ctgaagcactacgccgtggactccatccgccccaagtgccacgagctccaccagctgtgt
gaccagtttgcagctgacgtcgggcggaggagagggctgctgggcagggcgctggatctg
cacggcctcctcgaggcgtccatgaagtggtgtgacgagggcatctacctgctggcctcg
cagccggtggacaagtgccaggcccaggacggcgccgaggcggccctccaggaggtcgag
aagtttctggagacgcgtgcggaaaacaagatccaggagctcagtaaaatctaccaggac
tacgaacccatcctcacccgagacctgctggagcacgtgcagaaggtcttccggaagcag
gagagcgtggaggagatgtttcaccggagacaggcgagcctcaagaagctggctgccaag
cagacgcggcccgtgcagccggtggccccccggccagaggcacccgcgaaatcgccctgc
ccctccccgggcatccggagaggctccgagatccacagttctgagggcagcgtgctccgg
agggggccctacaggagagccaggagtgaagtgagtgagggccggcagggccgtggccgc
tccaccggggacgaggagagcctggccgtcctgcggaggcacgtgatgaacgagcttctg
gacacagagcgggtctacgtggaggagctgctgtgcattctggagggctacgctgctgag
atggacaaccctttaatgacacatctcatctcgacgggacttcaaaacaagaaggatgtt
ctgtttggaaacatggaagaaatttaccactttcataacagaatattcctgagggagctg
gagaactacatagactgcccagagctggttggaaggtgctttctagaaaggatggagcag
ttccaggtctacgagaagtactgccagaacaagccgcgctccgagagcctgtggagacag
tgctctgactgcccgttcttccaggaatgccagaagaagctggaccacaagctgagcctc
gactcctacctgctgaagccagtccagaggatcaccaagtaccagctgctgctcaaggag
atgctgaaatacagcaagagctgcgagggggccgaggacctgcaggaggccctgagctcc
atcctgggcatcctcaaggcggtgaacgactccatgcacctgatcgccatcacgggctat
gaggggaacctgagcgacttggggaagctgctgatgcagggctccttcagcgtctggacg
gaccacaagaagggccacgccaaggtgaaggacctggccaggttcaagcccatgcagcgc
cacctgttcctgcacgagaaggccgtgctcttctgtaagaagcgggaggagaacggcgag
ggctacgagaaggccccgtcctacagcttcaagcagtccctgaacatgacggccgtcggc
ataacagagaacgtgaaaggggatgcgaagaagttcgagatctggtacaacgccagagag
gaggtgtacatcgtacaggcaccaactcctgaaatcaaggccgcctgggtgagcgagatc
cggaaggtgctgacgagccagctgcaggcgtgcagagaggccagccagcaccgagccctg
gagcagtcccacagcctgcccctgcccgcgcccgccggcaccagtccctctaaagggaac
acaaaagacgtcagaaagttggaagaaagaaaaacggacccgctgaacctggagggatac
gtgggccccgcgccactgccgaggccccccgagaaggacagagatgacgcggtcactagc
tctacttcagaaagctctgcgctttccaaaaagcgcttcaccctgcagagctttgctgcc
ctcaaaggtcagaaagcctctcctaccagtcccgacaaaaaagctaagcgacaccaagta
aagagcgacccaacgccttttggtttacgaggttggagcaaaacgtctaacccgccagag
gctcctgaggacaacgacggctggtccagtgccgaggagccggtcaactcctcggacgca
gaggaggaagggagagcaggcctcaggaagctggtccccgggaagtacaccgtcacgggg
ctggacgagaaggggggccccgacgcgctggtcctgaggagcggggacgaggtggagctg
gtgcaggagggcgacgagggcctctggttcgtgcggaacgtgagctccggcggcgagggc
tggctgccagcccgcaacctgtccgcgctcctcggccagcgcggcgcccccggttgcctg
agcagcccagagtccagcgcggggtccgccctgctgagcgcctcgtccagctgcagcgag
agctgcgcggccgccctcgcggacctgcaggggtag
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integrated database retrieval system
