Phocoena sinus (vaquita): 116743255
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Entry
116743255 CDS
T07759
Symbol
GPC6
Name
(RefSeq) glypican-6
KO
K08112
glypican 6
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
psiu00535
]
116743255 (GPC6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
psiu00537
]
116743255 (GPC6)
Proteoglycans [BR:
psiu00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
116743255 (GPC6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
psiu00537
]
Others
116743255 (GPC6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glypican
DUF5856
Motif
Other DBs
NCBI-GeneID:
116743255
NCBI-ProteinID:
XP_032467505
Ensembl:
ENSPSNG00000019532
UniProt:
A0A8C9CV91
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Position
18:63319227..64413017
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AA seq
555 aa
AA seq
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MPSWIGAVILPLSGLLLSLPAGADVKARSCGEVRQAYGAKGFSLADIPYQEIAGEHLRIC
PQEYTCCTTEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRHKKFDEFFRELLENAEKSL
NDMFVRTYGMLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWARLLERMFQLINPQY
HFSEDYLECVSKYTDQLKPFGDVPRKLKIQVTRAFIAARTFVQGLTVGREVANRVSKVSP
TPGCIRALMKMLYCPYCRGLPTVRPCNNYCLNVMKGCLANQADLDTEWNLFIDAMLLVAE
RLEGPFNIESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQPKPAPALRSARSAPENF
NTRFRPYNPEERPTTAAGTSLDRLVTDIKEKLKLSKKVWSALPYTICKDESVTAGTSNEE
ECWNGHSKARYLPEIMNDGLTNQINNPEVDVDITRPDTLIRQQIMALRVTTNKLKNAYNG
NDVNFQDTSDESSGSGSGSGCMDDVCPTEFEFVTTEAPAVDPDRREVDSSAAQLGHSLLS
GSLVCIALAWQRLCR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttggatcggggctgtgattcttcccctctccgggctgctgctgtccctccca
gccggcgcggatgtgaaggctcggagctgcggcgaggtccgccaggcgtacggtgccaag
ggattcagcctggcggacatcccctaccaggagatcgcaggggaacacttaagaatctgt
cctcaggagtacacgtgctgcaccacggaaatggaagacaagctaagccagcaaagcaaa
ctggagtttgaaaacctggtggaggagacgagtcactttgtgcgcaccactttcgtgtcc
aggcacaagaaatttgacgaatttttccgagagcttctggaaaatgcagagaagtcacta
aatgatatgtttgtacggacctatggcatgctgtacatgcagaattcggaagtgttccag
gacctcttcacagagctaaaaagatactacactgggggcaatgtgaatctggaggagatg
ctcaatgacttctgggctcggctcctggaacgaatgtttcagctgatcaacccacagtat
cacttcagcgaggactacctggagtgcgtgagcaaatacacagaccagctgaagccattc
ggagatgttccccggaagctgaaaattcaggtcactcgcgccttcattgctgctcggacc
tttgtccaggggctgaccgtgggcagagaagttgcaaatcgagtttccaaggtgagcccg
accccaggctgcatccgtgcgctcatgaagatgctgtactgcccttactgtcggggactc
cccacggtgagaccgtgcaacaactactgcctcaatgtcatgaagggctgcctggcaaat
caggctgatctcgacaccgagtggaatctgtttatagatgcaatgctcttggtggcagag
cgactggaaggaccattcaacattgagtcggtcatggacccaatagacgtcaagatctct
gaagccatcatgaacatgcaagagaacagcatgcaggtgtctgcaaaggtctttcaggga
tgtggccaacccaaacctgctccagccctcagatctgctcgctcagctcccgaaaatttt
aatacacggttcaggccttacaatcctgaggaaagaccaaccactgctgcaggcacaagc
ttggaccggctggtcacagacataaaagagaaactgaagctctctaaaaaggtctggtca
gcattgccctacaccatctgcaaggacgagagtgtgacggcgggcacgtccaacgaagag
gaatgttggaacgggcacagcaaagccagatacttgcctgagatcatgaacgatgggctg
accaaccagatcaacaaccccgaggtggacgtggacatcacgcggcccgacacgctcatc
agacagcagatcatggctctccgtgtgacgaccaacaaactgaagaacgcgtataacggc
aatgacgtcaacttccaggacacgagtgatgaatccagcggctcagggagtggcagtggg
tgcatggatgatgtgtgtcctacggagtttgagtttgtcaccacagaggcgccggcagtg
gatcctgacaggagagaagtagactcttctgcggcccagctgggacactcgctcctctca
ggatctctcgtctgcatcgccctggcgtggcagagactgtgcagataa
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