Phocoena sinus (vaquita): 116743284
Help
Entry
116743284 CDS
T07759
Symbol
RUBCNL
Name
(RefSeq) protein associated with UVRAG as autophagy enhancer isoform X1
KO
K25948
protein associated with UVRAG as autophagy enhancer
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116743284 (RUBCNL)
Membrane trafficking [BR:
psiu04131
]
Autophagy
Other autophagy associated proteins
Others
116743284 (RUBCNL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
Motif
Other DBs
NCBI-GeneID:
116743284
NCBI-ProteinID:
XP_032467558
Ensembl:
ENSPSNG00000012216
LinkDB
All DBs
Position
18:20689384..20726194
Genome browser
AA seq
667 aa
AA seq
DB search
MVSQSAGRQASPVDPWEGISNDPGDIDGSPSLLDTDHLSCASNIRFTRHRAAWINPQCEQ
QQLQDLPPQVPAVGNRESRVAWDAASPLGPSPLSLGYSVVETSLSKGTVDSMGSSSARGS
AEKGGDFSLTSKEERAVLPGRCPWTPLFTSSKIDLAASPCREADNTFFKPSQLTASTDAG
AIQVGGRTVSSNSVSPEAFVLPVDVEKENAHFYIADMIISVMENMKCSILSQQHTETWST
GGASGSLGNEPADLEVMFYSHIKQESGSSASSDSGSEGCAVLQVSPVVETPTYCDVMKED
CKCDLDEFVIVELGDFSNTTETCGCSCSSSKSVVYEPNFNSAELIAKELYHLFKKCWMSE
VNYQLAGSLNAAGSIVVNEECVQKDFESSTDIVQEIKLKSRIRGTGDWAPPRFQIIFNVH
PPLKRDLMVAAQNFFCAGCGTPIEPKFVKRLRYCEYLGKYFCDCCHSYAESCIPARILRM
WDFRRYYVSNFSKRLLDSIWHQPIFNLLHVGHGLYTKAKELDRVREIQEQLFHIRKLLKT
CRFAESTLKEFEQVPGHLTDELNLFSLEDLVRVKKGLLAPQLKDILKVSLAHVASCELCQ
GKGFICEFCRSTAVIFPFQTTTCRRCSACRACFHKQCFQASECPRCARIAARRRLLESLP
SVATSCP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcacagtcggcgggccggcaggcctctcctgtggacccctgggaaggaatcagc
aatgaccctggcgacattgatggttcgcccagcctcctggacacggaccacctctcttgc
gcatcaaacatcaggtttacgaggcacagagctgcctggattaacccccagtgtgagcag
caacagctgcaggacttgcccccccaggtgccagcagtggggaacagagagagccgtgtt
gcctgggacgctgcctctcccttgggcccttcaccgttatctcttgggtactccgtggtg
gagacatcattgtcgaagggcactgtggactccatgggcagctcctctgcccggggctca
gctgaaaaaggcggtgacttctctcttacttcaaaggaagaacgggcagtgctcccagga
cgctgtccttggacgcctctgttcacaagctccaagattgacttggctgcctccccgtgt
cgtgaggctgacaatacttttttcaagccttcccagctgacagcttccactgatgcaggt
gctattcaagtcggtggaagaaccgtttcttcaaattccgtctcaccagaggcattcgtg
ctccctgtggatgtagaaaaggaaaatgcccacttttacatcgcagatatgattatctca
gtcatggagaatatgaagtgtagtattctgagtcaacagcacacagagacctggagtaca
ggaggggccagcgggtcgctcgggaatgagccggcagacttggaagtgatgttttatagc
cacataaagcaggaatccggctcttccgcttcgtccgacagtggctctgaaggttgtgct
gtgttacaggtcagcccagtggttgaaacacctacttactgtgatgtgatgaaagaggac
tgcaaatgtgacttggatgaattcgttatcgtagaacttggagatttcagtaataccaca
gagacctgtggatgttcctgcagctcctctaagagtgtcgtttatgagccaaacttcaat
tcggctgagctaatagccaaagagttataccacctcttcaagaaatgctggatgtcagaa
gttaattatcagctggcaggctccctgaatgcagctggctccatagttgtaaatgaagaa
tgtgtccagaaagactttgaatccagcacggatatagtacaggaaattaaattgaagtcg
aggatcagaggcactggagactgggcgccccctaggtttcaaatcatatttaatgttcat
ccaccactcaagagggatctcatggtagcggcccaaaattttttctgtgctggctgtgga
actccgatagaacctaaatttgtgaagcggctccggtactgcgaatacctgggcaagtat
ttctgtgactgctgccactcgtacgcggagtcgtgcatccctgcccgcatcctcaggatg
tgggacttcaggaggtactatgtcagcaatttctccaaacggctgctggatagcatatgg
caccagcccatcttcaacttgctgcacgtcggccacggcctgtatacgaaggccaaggag
ctggacagagtgagggaaatccaggagcagctatttcatatcaggaagctgttgaagacc
tgcaggtttgctgaaagcacgttaaaggagtttgaacaggtgccaggacacttgactgat
gagcttaacctgttctccctggaggacctggtccgggtcaagaaagggctgctggcgccc
cagctcaaggacattctgaaagtttccctcgcgcacgtggccagctgtgagctgtgtcaa
ggaaagggtttcatttgtgaattttgccggagtacagctgtcatcttcccatttcagacc
acgacgtgtagaagatgttcagcatgcagggcttgctttcacaagcagtgcttccaggcc
tccgagtgcccccggtgtgcgaggatcgcggcgaggagaagacttttggaaagtttgccc
tctgtggcgacatcatgcccttga
DBGET
integrated database retrieval system
