Phocoena sinus (vaquita): 116743299
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Entry
116743299 CDS
T07759
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116743299 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116743299 (SPATA13)
Membrane trafficking [BR:
psiu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116743299 (SPATA13)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
116743299
NCBI-ProteinID:
XP_032467572
Ensembl:
ENSPSNG00000007928
UniProt:
A0A8C9BHL5
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Position
18:complement(2947727..3070217)
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AA seq
1196 aa
AA seq
DB search
MTTAQNGHGRGAAVPGPISDPKDPGMVTYPACRREARLSPARLLRLFSAGANRTRADPER
PRPAGLVGSSSTWNALASFRKMGSFKKLKTSVLQGIQNREGWDAAKEGAEERDLGKAVPN
GAAAGAPAGRCPPGPGFASDGSDPEDPDDGFARGALRSRSIRRAYGLGRIRLLDPEPPDP
EPAAREAPAREPERNGVCRRSKSTDSLTFLKKSSFRRKSASHLAELRRAPESGAPRRTLS
GSSADSDSSGGAPARPRRCRSPLRAPDLARVLRLVGDGAAGRPGDPGGAPPGPRPHSRLH
DDYSRRAVAGPERGRRGDEPQDPGLAGAGGSASDAAAGGAVPRAPGSSSRPPAREVSDRG
SKEPGPGDRSPVEPEPPLGPPRPTTPKPPSPRSPDAAPAKCPNSVSALSLSSVDSEERAE
GPVQREQGPGSFQDAVQTACDLGSENTGAGSHPQQSLGGTNSPEEKTDEVVTEGSWRRTS
APEEERLEAQRVPRRRCGPGRRSRPRPLSDYGQPVSLSLSIPEDAIAVDPQKEDPEDGDQ
QPSRAPIDPADQTPAGGCPRGAPRRRPISVIGGVGFYGSSQAEEGEAILPQPAARPPVPA
HQVPPYRAVSARLRPCAFSQSTPIGLDRVGRRRLMRASNISSDGGAESSALADDNGSEED
YSYEDLCRANPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDEQELGFKAGDVIQVL
EASHKDWWWGRSADREAWFPASFVRLRVNQEELAEGSSGTPGEEPAEDAGRGRHKHPESK
QQMRTNVIQEIMDTERVYIKHLRDICEGYIRQCRKHTAMFTVAQLATIFGNIEDIYKFQR
KFLKDLEKQYNQEEPHLSEIGSCFLEHQEGFAIYSEYCNNHPGACAELAGLMKQGRYRHF
FEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTAREHSDYRNIKAAYEAMKNV
ACLINERKRKLESIDKIARWQVSIVGWEGQDILERSSELIHSGELTRVTRQGKSQQRTFF
LFDHQLVACKKDLLRRDVLYYRGSTDMDAVELVDLEDGRDGARTLGVRNAFKLVSRTGDE
AHLFCAKKPEDKARWLQACRDERRRVQEDRAMGMEISENQKKLAMLNAQKAGHGKSKGYG
GGCPSAPPLQSLRPVHQRHVTVPASLPQQQVFALAEPKRKPSLFWHTFNKLTPFRK
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgaccacggcccagaacggccacgggcgcggagctgcggtccccggtcccatctctgat
cccaaagaccccggcatggtgacctacccggcgtgtcgccgggaggcgcggctcagcccg
gcccgcctcctgcgcctcttctccgccggcgcgaacaggacgcgcgccgaccccgagcgg
ccccggcccgccggcctcgtgggcagctcctccacgtggaacgccctggcctccttccgg
aaaatggggtctttcaaaaaactgaagacctcggtcctccagggaattcagaatcgggag
ggatgggacgccgccaaagagggggccgaggaacgcgacctgggcaaggcggtccccaac
ggcgcggcggccggagcccccgcgggcaggtgccccccggggccgggcttcgcgtccgac
ggctcggaccccgaggaccccgacgacggcttcgcacgcggcgctctccggtcccgcagc
atccgccgcgcctacggcctggggcgcattcgcctcctggacccggagccgcccgaccca
gagcccgcggcacgcgaggccccggcgcgggagcccgagaggaacggcgtctgcaggcgg
agcaagagtacggacagcctgaccttcctcaagaagagctctttccggaggaagtcggcc
tcgcacctggccgagctgcggcgcgcgcccgagagcggggccccgcggaggacgctgagc
ggctcgtccgcggactccgacagctccggcggggcccccgcgaggcccaggcgctgcagg
agcccgctgcgggccccggacctggcccgggtgctgcggctcgtgggtgacggcgcggcc
ggccggccgggggaccccgggggcgccccgcccgggccgcggccgcacagccggctgcac
gacgactactcccgccgcgcggtcgccggccccgagcgcgggcgaaggggcgacgagccc
caggaccccgggctggcgggtgctgggggctcggccagtgacgcggctgccggaggtgcc
gttcctcgcgcccccggctcttcctccaggcccccggcccgggaggtgtcggacagaggc
tccaaggaaccgggccctggcgaccggtctcccgtggagcccgagcctcctctcggccct
ccgaggcccaccacgcccaagccccccagccctcggagccccgacgcagcacctgccaag
tgtcccaacagcgtcagcgcgctgtccctgagttcagtggacagcgaggaaagggcagag
gggcccgtccagagggagcaaggccccgggtccttccaggatgcggtgcaaaccgcctgt
gacctgggcagtgagaacaccggcgccggcagccacccgcagcagagcctcggggggacg
aactctccagaagaaaagacggacgaggttgtgaccgaggggtcctggaggcggacctcc
gcaccagaggaagagaggctggaggctcagagggtccccaggaggagatgcggacccggg
aggaggtcaaggccccgaccactctctgactacggccagccggtcagcctaagtctgtcc
atccctgaagacgcgatcgccgtagacccccagaaagaggacccagaggacggtgaccag
cagcccagcagggcccccatcgaccctgcagaccagacccctgctgggggctgcccccgg
ggggcgccgagaagacgccccatctccgtgatcggcggagtcggcttctatgggagcagc
caggcggaggagggggaggccattctgccccaaccagctgcccggccgcccgtgcccgcg
caccaggtgccgccctaccgcgcggtgtcggcccggctgcggccgtgcgccttctcccag
agcacccccatcgggctggaccgcgtgggacgccggcggctcatgagagcatccaacatt
tcttctgatggcggtgcggagtcatcagccctagcggatgacaatggcagcgaggaggac
tacagctatgaagacctctgtcgggccaacccccggtacctgcagccgggcggggagcag
ctggccatcaacgagctgatcagcgatggcagcgtggtctgcgccgaggccctgtgggac
cacgtgaccatggacgagcaggagctgggcttcaaggccggggacgtcatccaggtcctg
gaagcctcccacaaggactggtggtggggccgcagcgcagacagggaggcctggttcccc
gccagcttcgtccgactgcgggtcaaccaggaggagctggcggagggctccagcggcacc
ccgggcgaggagccggcggaggacgcgggccggggccgccacaagcaccccgagagcaag
cagcagatgcggaccaacgtcatccaggagatcatggacaccgagcgggtgtacatcaag
cacctccgggacatctgcgagggctacattcgacagtgtcgcaagcacacggcgatgttc
acggtcgcgcagctcgccaccatttttggaaacattgaagatatttacaaattccaaaga
aagttcctgaaagaccttgagaaacaatacaatcaagaggaacctcacctgagtgaaata
gggtcctgctttcttgaacatcaagaaggcttcgccatctactccgagtactgcaacaac
cacccgggcgcctgcgccgagctggcgggcctgatgaagcagggccgctaccgacacttc
ttcgaggcctgccgcctgctccagcagatgatcgacatcgccattgacggcttcctgctg
acgcccgtgcagaagatctgcaagtacccgctgcagctggccgagctgctcaagtacacc
gctcgggagcacagcgattacaggaacataaaggcagcgtacgaggccatgaagaacgtc
gcctgtttgatcaatgagcgaaaacgcaagctggaaagcatagacaagatagcacggtgg
caggtgtccatcgtgggctgggagggccaggacatcctcgagcgcagctcggagctgatc
cactccggggagctgaccagggtcacccggcagggcaagagccagcagcggacgttcttc
ctgtttgaccaccagctggtggcctgcaagaaagacctgctgcggagggacgtgctctac
taccgcggcagcacagacatggacgccgtggaactcgtggacctggaggacggccgcgac
ggtgcccgcaccctcggcgtcagaaacgccttcaagctggtcagcaggacgggtgatgag
gcgcacctgttctgtgccaagaagcctgaggacaaggcacggtggctgcaggcctgcagg
gacgagcgcaggcgggtgcaggaggaccgggcgatgggaatggaaatttcagaaaatcag
aagaaacttgccatgttaaatgctcaaaaggcgggacatggaaagtcaaaaggctacggt
ggaggatgcccctcggcccccccactccagagcctgcggccggtccaccagcgccacgtc
accgtgcccgccagcctgccgcagcagcaggtgttcgccctggcggagcccaagaggaag
ccgtcgctgttctggcacaccttcaacaagctcacccccttcaggaagtga
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