KEGG   Phocoena sinus (vaquita): 116743432
Entry
116743432         CDS       T07759                                 
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
  KO
K12587  exosome complex component MTR3
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    116743432 (EXOSC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psiu03019]
    116743432 (EXOSC6)
Messenger RNA biogenesis [BR:psiu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     116743432 (EXOSC6)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 116743432
NCBI-ProteinID: XP_032467703
Ensembl: ENSPSNG00000018796
UniProt: A0A8C9CST1
LinkDB
Position
19:46208156..46209731
AA seq 272 aa
MPGDNRRIRGPGESQPPQLYATDEDEVPAARDPTRLRPVYARAGLLSQAKGSAYLEAGGT
KVLCAVSGPRQVEGGERGGGPAGAGGETPAALRGRLLCDFRRAPFSGRRRRAPPGGSEER
ELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAAIALADAGIEMYDLV
VGCGLSRAPGPEPTWLLDPTLLEEERAAAGLTVALMPVLNQVAGLLGSGEGGPTESWAEA
VRLGLEGCQRLYPVLQQCLVRAARRRGAATPP
NT seq 819 nt   +upstreamnt  +downstreamnt
atgcctggggacaaccgccgcatccgcgggcccggggagtcgcagccgccgcagttgtac
gcgaccgacgaggacgaggtgccggccgctcgcgacccgacgcggctccggcctgtgtac
gcgcgcgccgggctgttgagccaggccaagggctcggcctacctggaggcgggaggcacc
aaggtgctgtgcgcagtgtccggcccacgccaggtagagggcggtgagcgcggtggcggc
ccggccggagcgggcggcgagaccccggccgcgctgcggggccgcctgctctgcgacttc
cgccgcgcgcccttctcgggccgccggcgccgcgctcccccgggtggcagcgaggagcgt
gagctggcgctggcgctgcaggaggcgctcgagccggccgtgcgcctgggccgctacccg
cgcgcgcagctcgaggtgtcggcgctgctgctcgaggacggcggctcggcactggccgcc
gcgctcacggctgccgcgatcgccctggccgacgcgggcatcgagatgtacgacctggtg
gtgggctgcggcttaagccgcgcgccggggcccgagcccacctggctgctggaccccacg
ctgctagaggaggaacgcgccgccgccggcctcaccgtggcgcttatgccggtgctcaac
caggtggccgggctgctgggcagcggggagggcggcccgaccgagagctgggcggaggcc
gtgcgcctgggtctcgagggctgccagcgcctctaccccgttttgcagcagtgcttagta
cgggccgcccgccggaggggcgccgccacgccgccctga

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