Phocoena sinus (vaquita): 116743434
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Entry
116743434 CDS
T07759
Symbol
LRP3
Name
(RefSeq) low-density lipoprotein receptor-related protein 3 isoform X1
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116743434 (LRP3)
Membrane trafficking [BR:
psiu04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
116743434 (LRP3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Motif
Other DBs
NCBI-GeneID:
116743434
NCBI-ProteinID:
XP_032467706
Ensembl:
ENSPSNG00000019712
LinkDB
All DBs
Position
19:complement(17481507..17493466)
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AA seq
781 aa
AA seq
DB search
MEKRAAAGPDAAPGARAQLAVVCLVNIVLTGRLSSAVPALGEASTSQPPLLTAACSGKLE
QHTERRGVIYSPAWPLNYPPGTNCSWYIQGDRGDMITISFRNFDVEESHQCSLDWLMLGP
AAPPRQEAFRLCGSAIPPAFISARDHVWIFFHSDASSSGQAQGFRLSYIRGKLGQVSCQA
DEFRCDNGKCLPGPWQCNTVDECGDGSDEGNCSAPASEPPGSLCPGGTFPCSGARSTRCL
PAERRCDGTQDCGDGSDEAGCPDLACGRRLGSFYGSFASPDLFGAARGPSDLHCTWLVDT
QDPRRVLLQLELRLGYDDYVQVYEGLGERGDRLLQTLSYRSNHRPVSLEAAQGRLTVAYH
ARARSAGHGFNATYQVKGYCLPWEQPCGSSREGDVDDTGEQGCFSEPQRCDGWWHCASGR
DEQGCPACPPDQYPCEGGSGLCYTPADRCNNQKSCPDGADEKNCFSCQPGTFHCGTNLCI
FETWRCDGQEDCQDGSDEHGCLAAVPRKVITAALIGSLVCGLLLVIALGCAFKLYSLRTQ
EYRAFETQMTRLEAEFVRREAPPSYGQLIAQGLIPPVEDFPVYSASQASVLQNLRTAMRR
QMRRHASRRGPSRRRLGRLWNRLFHRPRAPRGQIPLLTAARTSQTVLGDGLLQPAPGAGL
DPPAPLTDTGSAGAAGEGPPGAPSHAPEVGPSVPPPSGLRDPEARPVHKDRKAGRDPLVD
NPAPVDMPRESCSAQGPHPPAPTAGSTLGPHPPEPLGVCRSPLPPCSPTLEASDDEALLV
C
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcgggcagccgcggggccggatgcggcgccgggcgcccgggcgcagctcgcc
gtcgtctgcctggtgaacattgttctcaccgggcggctcagcagcgccgttcctgcctta
ggtgaggctagcacctctcagcctcctctcctgacagccgcctgcagcgggaagctggag
cagcacacggaacgacgcggtgtcatctacagcccagcctggcccctcaactacccaccg
ggtaccaactgcagctggtacatccagggtgaccgtggggacatgatcaccatcagcttc
cgcaactttgacgtggaggaatcccaccagtgctccctggactggctcatgctgggccca
gcggccccgccccgccaggaggccttccggctctgcggctccgccatcccgcctgccttc
atctctgcccgggaccacgtttggatcttcttccactcggacgcctccagttctggccag
gcccagggcttccgtctctcatacatccgagggaagctgggccaggtttcctgccaggct
gacgagttccgctgtgacaacggcaagtgcttgccgggcccgtggcagtgcaacaccgtg
gacgagtgcggcgacggctctgatgagggcaattgctcggcgcctgcctccgagccgccg
ggcagcctgtgccccgggggcaccttcccctgcagcggggcgcgctccacacgctgcctg
cccgccgagcggcgctgcgacggcactcaggactgcggcgatggctccgacgaggctggc
tgccccgacctggcctgcggccggcgcctgggcagcttctatggctccttcgcctcccca
gacctgttcggcgcagcccgtgggccctcggaccttcactgcacgtggctggtggacaca
caggacccacggcgtgtgctgctgcagctggaactgcggctgggctacgacgactacgtg
caggtgtacgagggcctgggcgagcgtggggaccgcctgctgcagacgctctcctaccgc
agcaaccaccggcccgtgagcctcgaggccgcccagggccgcctcaccgtggcctaccac
gcccgtgcccgcagcgccggccacggcttcaacgccacctaccaggtgaagggctattgc
cttccgtgggagcagccgtgcgggagcagccgcgagggcgacgtggacgacacgggcgag
cagggctgcttctcggagccgcagcgctgcgacggctggtggcactgcgccagcggccgg
gacgagcagggctgccccgcctgcccccccgaccagtacccctgtgagggtggcagcggc
ctctgttacacgccggccgaccgctgcaacaatcagaaaagctgccctgatggcgccgac
gagaagaactgcttctcctgccagccgggcaccttccactgtggcaccaacctgtgcatc
ttcgagacgtggcgctgtgacggccaggaggactgccaggacggcagcgacgagcacggc
tgcctggcggccgtgccccgcaaggtcatcaccgctgcgctcatcggcagcctggtctgc
ggcctgctactcgtcattgccctgggctgcgccttcaagctctactccctgcgcacgcag
gagtacagggcctttgagacccagatgacacgcctggaggctgagtttgtgcggcgagag
gcgcccccgtcctatgggcagctcattgcacagggcctcattccacctgtggaggacttt
cccgtctacagtgcgtcacaggcctcggtgctacagaaccttcgcacggccatgcggcga
cagatgcgccggcacgcctcccgccgcgggccctcccgccgccgcctcggccgcctctgg
aaccggctctttcaccggccgcgggcaccgcgcggacagatcccgctgctgacggctgcg
cgcacctcacagacggtgctgggcgatgggctcctccagccggcaccgggggctggccta
gaccccccggcacccctaacagacacaggcagcgcaggggcagccggggaggggcccccc
ggcgcccctagccacgcaccggaggtggggccttctgtgccacccccctcgggcctgcgg
gacccagaggccaggccagtgcacaaggacagaaaggccggcagggaccctctggtggac
aacccagcccctgtggacatgcctcgggagtcctgctcggcccagggccctcaccccccg
gcccccactgccggcagcaccctaggcccccacccaccagagccactgggtgtctgcagg
agccccctgccaccctgctccccaacgttggaggccagtgacgacgaggccctgctggtc
tgctga
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