Phocoena sinus (vaquita): 116743440
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Entry
116743440 CDS
T07759
Symbol
IRX3
Name
(RefSeq) iroquois-class homeodomain protein IRX-3
KO
K24889
iroquois-class homeodomain protein IRX
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116743440 (IRX3)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
116743440 (IRX3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
BUD22
MRP-S32
Motif
Other DBs
NCBI-GeneID:
116743440
NCBI-ProteinID:
XP_032467715
Ensembl:
ENSPSNG00000016643
UniProt:
A0A8C9CBL9
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Position
19:complement(29020830..29024197)
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AA seq
502 aa
AA seq
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MSFPQLGYQYIRPLYPPERPGAAAGGGSAGARGGPGAGASELAASGSLSNVLSSVYGAPY
AAAAAAAAAAQGYGAFLPYAAELPIFPQLGTQYELKDSPGVQHPAAATAFPHPHPAFYPY
GQYQFGDPSRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
ARRRLKKENKMTWAPRSRTDEEGNAYGSEREEEDEEEDEEDSKRELELEEEELGGEEEDT
GGEGLADDEEDEEIDLENLDGATAGPELALPGAAHRDGDLGLEPTSDSKNSDSDDSSEGL
EERPLPVLSLAPVPPPVAATPPSPPSPSAGLDPCAPAPAPASALQKPKIWSLAETATSPD
NPRRSPPGAGGSPPGAAVAPPALQLSPAAAAAAQRLVSAPLGKFSAWTNRPFPGPPPGPR
PHPHPLSLLGSAPPHLLGLPGAAGHPAAAAAFARPAEPEGGTDRCSALEVEKKLLKTAFQ
PVPRRPQNHLDAALVLSALSSS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccccagctcggataccagtacatccgcccgctctacccacccgagcgcccg
ggggccgccgccggcggtggcagcgctggggcacggggcggcccgggagccggagcctca
gagctggctgcctcggggtccctgtccaacgtactctcgtccgtgtacggggcgccctac
gccgcggcggcagcggcagccgcagccgcccaaggctacggcgccttcctgccctacgcg
gccgagctgcccatcttcccgcagctgggcacgcagtatgagctgaaggacagcccgggg
gtgcagcatccggccgcggccaccgcgtttcctcacccgcaccccgccttctacccatac
ggccagtaccagttcggggacccgtcccgtccaaagaacgccacccgggagagcactagc
acgctgaaggcctggctgaacgagcaccgcaagaacccctaccccaccaagggcgagaag
atcatgctggccatcatcaccaagatgaccctcacccaggtgtccacctggttcgccaac
gcgcgccggcgcctcaagaaggagaacaagatgacttgggcgccccgcagccgcacggac
gaggagggcaacgcttacgggagcgagcgagaggaggaagacgaggaggaggatgaagaa
gacagcaaacgcgaactggagctggaggaggaggaactcgggggggaggaggaggacacc
gggggcgagggcctggctgacgacgaggaggacgaggagatcgatttggagaacttagac
ggcgcgaccgcggggcccgagctggccctgcctggcgcggcgcacagggacggcgatctc
ggcctggaacccacctcagactccaagaatagcgactccgacgacagttccgagggcttg
gaggagcgtccactgcctgtcctgagtctggccccagtgccaccgccggtggccgcgact
ccgccatcaccgccctcgccctcagcaggcctggacccctgcgctcccgcaccagcgccc
gcctcggccctgcaaaaacccaagatctggtccctggccgagaccgccacaagcccggac
aacccgcgccgctcgcctccgggcgcggggggttctccccccggggcagccgtcgcgccc
ccagccctgcagctctctccggccgccgccgccgcggctcagagactcgtctcggcgccg
ctgggcaagttctccgcttggaccaaccggccgttcccaggcccaccgcccggcccacgc
ccgcacccgcacccgctctccctgctgggctcggcccctccacacctgctgggacttccc
ggagccgcgggccacccggccgccgccgccgccttcgctcggccggcggagcccgagggc
ggaacagatcgttgtagtgccttggaagtggagaaaaagttactcaagacagctttccag
cccgtgcccaggcggccccagaaccacctggacgccgctctggtcttatcggctctctcc
tcatcctag
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