Phocoena sinus (vaquita): 116743444
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Entry
116743444 CDS
T07759
Symbol
HLX
Name
(RefSeq) LOW QUALITY PROTEIN: H2.0-like homeobox protein
KO
K09339
homeobox protein HLX1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116743444 (HLX)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
116743444 (HLX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
116743444
NCBI-ProteinID:
XP_032467726
Ensembl:
ENSPSNG00000001110
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All DBs
Position
1:complement(166889577..166895157)
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AA seq
486 aa
AA seq
DB search
MFAAGLAPFYASNFSLWSAAYCSSAGPGGCSFPLDPAAVKKPSFCIADILHAGVGETGAA
PEGLAGASAAALTAHLGSAHPHASFQAATRSPLRPTPVVAPSEVPAGFPPRLSPLSAAYH
HHHPQQPPQQQQPQQQQPPAPPRAGSLQXPASGSRLVPNPHHSASAPAPSSKDLKFGIDR
ILSAEFDPKVKEGNTLRDLTSLLTGGRPAGMHLPALQPSTGQFFASLDPINEASAILSPL
SSNPRNSVQHQFQDTFPGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKY
VTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDKEAGEKPSGGAPAGDG
EPELSPSRSEGEAESESSDSESLDMAPSDTERTEGAERSLHQTTVIKASAAGALLAASSG
GSGGTGGGGGGGFNFGVLSSGSTGGAGSSGGHSSGSGASELLPALQPALGSAPKSPEPAP
APLGGL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgccgggctggctcccttctacgcgtccaacttcagcctgtggtcggccgcc
tactgttcctccgccggcccgggcggctgctccttcccactggaccccgctgccgtcaag
aaaccctccttctgcatcgcggacatcctgcacgccggcgttggggagacgggggcggct
ccggagggtctggcgggggcctcggccgctgccctcaccgcacacttgggatcggctcac
ccgcacgcctctttccaagctgccaccagatccccgcttcgacccaccccggtggtggcg
ccctccgaagtcccggctggcttccctccgcggctgtccccgctctcagccgcctaccac
caccatcacccacaacagccaccgcagcagcagcaaccgcagcagcagcagcctccggct
ccaccccgggctggaagcttgcagnccccagcctccgggtcgcggctggtcccgaatccc
caccatagcgcttccgccccggccccctccagtaaggacctcaaatttggaattgaccgc
attttgtctgcagaatttgacccaaaagtcaaggaaggcaacacactgagagatctcaca
tcgctgctaaccggcgggcggcccgcggggatgcacctccccgctctgcagccctccacc
ggccagttcttcgcgtctctagatcccattaacgaggcttctgccatcctgagtccctta
agctcgaacccgagaaattcagttcagcatcagtttcaagacacctttccaggtccctac
gctgtgctcacgaaggacaccatgccacagacgtacaagagaaagcgctcctggtcacgg
gcggtcttctccaacctgcagaggaaaggtctggagaaaaggtttgagattcagaagtac
gtgaccaagccagaccgaaagcagctggccgcgatgctgggtctcaccgatgcccaggtg
aaggtgtggttccagaaccggcggatgaagtggcgacactccaaggaggcccaggcccag
aaggacaaagacaaggaggctggcgagaaaccgtcgggcggagccccggctggcgacggc
gagccggagctgagccccagccgctcggagggcgaggctgagagcgagagtagcgactcc
gagtctctggacatggcccccagcgacacggagcggactgaaggggccgagcggtctctg
caccaaacgacggtcatcaaggcctcggccgccggcgccctcctcgccgccagcagcgga
ggcagtggcgggaccggcggcggcggcggcggcggttttaacttcggcgtcctcagtagc
ggcagcaccggcggcgccgggagctccggcggccacagcagcggcagcggcgcctcggag
ctgctccctgcgctccagccagcccttggcagcgcccccaaaagccccgagcccgccccg
gcgccgctcggcggcctctag
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