Phocoena sinus (vaquita): 116743483
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Entry
116743483 CDS
T07759
Name
(RefSeq) sialic acid-binding Ig-like lectin 5
KO
K06549
sialic acid binding Ig-like lectin 5
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
psiu04090
]
116743483
04091 Lectins [BR:
psiu04091
]
116743483
CD molecules [BR:
psiu04090
]
Proteins
116743483
Lectins [BR:
psiu04091
]
I-type lectins (Siglecs)
116743483
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
V-set
ig
I-set
C2-set_2
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
116743483
NCBI-ProteinID:
XP_032467810
LinkDB
All DBs
Position
19:complement(6509121..6522283)
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AA seq
607 aa
AA seq
DB search
MCKYSTSYCGAGILVWTHTRPQDRQGEASCWGFLPGQTGRSRNWTVLETPGPLDMDRLLL
LLLPLLREGSLQQDPWYQLQVQESVTVQEGLCVLVPCTVSYPSLGRTDSTPIYGEWFRKV
DRPSQMDLPMATNNPGRGVKKKRKIPFHLLGDPGANNCSLGIAEARKGDSGNYYFQLMRS
DVKHSYKNNLLIVNVTALTRTPDIYIKEPLESGSSSHVTCSVPGACDRATPPTISWTGAA
LRPPGLDSKGAYNSSEILLTPGPQDHGTNLTCRVTFRRAGVSTERTVMLNVSYAPQNLTI
SISRGNGTELKYLGNGSSLPVLEGESLRLACVTDSNPPATLSWSWGSWTLSPSHPSNPGV
LQVPRVVSGHEGEFTCLAQHPQGSLRTSVRLSVQNAPQLLGPSCSQEDEGLHCDCSSRAQ
PAPSLRWRLGEGLLEGNFSNASFKVTSSWAGPWANSSLCLREGLSSGLRLGCEAQNVHGA
QSATVLLLPGKPKLGGEFVLGAVGGAGIAGLLSLCSCFIFFTVKTFRKAPGEKDAPSLLG
PTSQGYQHECPPGSLRDLPLPVVAAPTSGVERELHYASLSFYMLRPREPQDQEAASTTEY
AEIKIHK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaaatattccacttcgtactgtggagctgggatccttgtgtggacacatacacgg
ccccaagacaggcagggagaagcttcctgttggggcttcctccccggacagacaggcagg
tccagaaactggacagtcctggaaactcctggccccttggacatggacaggttgctgctg
ctgctgctgcccctgctacgggaggggtccctgcagcaggatccgtggtaccagctgcaa
gtgcaggaatcggtgacagtgcaggagggtttgtgtgtccttgtgccctgcaccgtctcc
tatccctcgcttggccggaccgactctacacccatttatggtgaatggttccggaaagtg
gatagaccatcccaaatggaccttcccatggccacaaacaacccaggcaggggagtaaaa
aagaagagaaaaatcccattccacctccttggggaccctggggcgaacaactgctccctg
ggcatcgcagaagcccggaagggggacagtggaaactattattttcagctgatgagaagt
gatgtgaaacatagttacaaaaataacctgctcattgtgaacgtgacagcgctgacacgg
acccccgatatctacatcaaggagcccctggagtccggctctagcagccacgtgacgtgc
tccgtgccaggggcctgtgaccgggccacgccgcccaccatctcctggaccggggctgcc
ctccgccccccgggactggactcgaagggggcctataactcctcggagatcctgctcacc
cccggcccgcaggaccacggcaccaacctcacctgccgggtgaccttccgcagggctggc
gtgagcacggagaggaccgtcatgctcaacgtgtcctacgccccccagaacctgaccatc
agcatctcccgaggaaatggcacagagctgaaatacctggggaacggctcatctcttcct
gtcctggaaggagaatctctgcgcctggcctgtgtcaccgacagcaaccccccagccaca
ctgagctggtcctgggggagctggaccctgagcccctcacatccctcgaaccctggagtc
ctgcaggtgccccgggtggtgtcgggccatgaaggcgaattcacctgcctagctcagcat
cctcagggctccctgcggacctccgtgcgtctctccgtgcagaacgccccgcagctgctg
ggaccctcctgctcccaggaggatgagggtctgcactgcgactgttcctcccgagcccag
ccggccccctccctgcgctggcggctgggggaggggctgctggaggggaatttcagcaac
gcctccttcaaggtcacctccagctgggctgggccctgggccaacagctccctgtgcctc
cgcgaggggctcagctccggcctcagactcggctgcgaggcccagaacgtccacggggcc
cagagtgccactgttctgctgctgccagggaagcccaagcttggaggagaattcgttctg
ggggccgtcggaggagctggcatagctggcctgctcagtctctgttcctgcttcatcttc
ttcacagtgaagaccttcaggaaggcccccggtgagaaggatgcaccctccctgctgggt
cccacctcccagggttaccagcatgagtgtcctccaggcagcctccgggacctcccccta
ccagtggtggccgcccccacatctggggtggaacgtgagctccattacgcctccctcagt
ttctacatgctgaggccccgggagcctcaggaccaggaggccgccagcaccaccgaatat
gctgagatcaagatccataaatga
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