Phocoena sinus (vaquita): 116743492
Help
Entry
116743492 CDS
T07759
Symbol
CHMP1A
Name
(RefSeq) charged multivesicular body protein 1a isoform X1
KO
K12197
charged multivesicular body protein 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04144
Endocytosis
psiu04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116743492 (CHMP1A)
09143 Cell growth and death
04217 Necroptosis
116743492 (CHMP1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116743492 (CHMP1A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116743492 (CHMP1A)
Membrane trafficking [BR:
psiu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
116743492 (CHMP1A)
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116743492 (CHMP1A)
Exosomal proteins of other body fluids (saliva and urine)
116743492 (CHMP1A)
Exosomal proteins of colorectal cancer cells
116743492 (CHMP1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
LysX_preATP_grasp
DUF6247
DUF5871
Sde182_NH-like
Fes1
Motif
Other DBs
NCBI-GeneID:
116743492
NCBI-ProteinID:
XP_032467845
Ensembl:
ENSPSNG00000008578
LinkDB
All DBs
Position
19:complement(59210534..59216374)
Genome browser
AA seq
197 aa
AA seq
DB search
MRNPAERLRRGRPTAADGTPGLAGAGPHLASPPAFQALQQKNVECARVYAENAIRKKNEG
VNWLRMASRVDAVASKVQTAVTMKGVTKNMAQVTKALDRALSTMDLQKVSAVMDRFEQQV
QNLDVHTSVMEDSMSSATTLTTPQEQVDSLIMQIAEENGLEVLDQLSQLPEGASAVGESS
VRSQEDQLSRRLAALRN
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaccctgcggagaggctgcgaaggggccgccccacagcagcagacggcacccca
ggactggccggggccgggccccatctggcatctccccctgcatttcaggcccttcagcag
aagaatgtggagtgtgcgcgggtgtacgccgagaacgccattcgcaagaagaacgaaggt
gtgaactggctccgcatggcgtcccgcgtggatgccgtggcctccaaggtgcagacggcc
gtgaccatgaagggggtgaccaagaacatggcgcaggtgaccaaagccctggaccgggcc
ctcagcaccatggacctgcagaaggtctctgcggtgatggacagatttgagcagcaggtg
cagaacctggacgtgcacacgtcggtgatggaggactccatgagctcggccaccacgctg
accacaccacaggagcaggtggacagcctcatcatgcaaatcgccgaggagaatggccta
gaggtcctggaccagctcagccagctgcccgagggcgcctctgccgtgggcgagagctcc
gtgcgcagccaggaggaccagctgtctcggaggttggccgccctgaggaattag
DBGET
integrated database retrieval system
