Phocoena sinus (vaquita): 116743613
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Entry
116743613 CDS
T07759
Symbol
SNRPA
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116743613 (SNRPA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116743613 (SNRPA)
Spliceosome [BR:
psiu03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
116743613 (SNRPA)
Complex B
116743613 (SNRPA)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
116743613
NCBI-ProteinID:
XP_032468149
Ensembl:
ENSPSNG00000018837
UniProt:
A0A8C9CJ06
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All DBs
Position
19:complement(11810613..11821658)
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AA seq
282 aa
AA seq
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MAVPETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFK
EVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKRKPKSQETPA
AKKAVQGGAAAPVVGAVQGPVPGMPPMTQAPRIMHHMPGQPPYMPPPGMIPPPGLAPGQI
PPGAMPPQQLMPGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV
PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNAMKISFAKK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcagttcccgagactcgccccaaccacactatttatatcaacaatctcaacgagaag
atcaagaaggatgaactgaagaagtccctgtacgctatcttctcccagtttggccagatc
ctggatatcctggtatcacgaagcctgaagatgaggggccaggcctttgtcatcttcaag
gaggtcagcagcgccaccaatgccctgcgctccatgcagggtttccccttctacgacaag
cccatgcgcatccagtacgccaagactgactcggatatcattgccaagatgaagggcacc
tttgtggagcgtgaccgcaagcgggagaagaggaagcccaagagccaggagaccccggct
gccaagaaggctgtgcagggtggggcggccgcccctgtggtgggcgctgtccaggggcct
gtcccgggcatgccgccgatgactcaggcgccccgcatcatgcaccacatgccgggccag
cctccctacatgccgccccccggcatgatcccgcctccgggccttgcacccggccagatc
ccaccaggggccatgcctccacagcagcttatgccgggacagatgccacctgcacagcct
ctttcagaaaatccaccaaatcacatcttgttcctcacaaacctgcctgaagagaccaac
gagctcatgctttccatgctttttaaccagttccctggcttcaaggaggtccggctggtc
ccagggcggcacgacatcgccttcgtggagtttgacaatgaggtgcaggcaggggccgca
cgcgacgccctgcagggtttcaagatcacccagaacaatgccatgaagatctcctttgcc
aagaagtag
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