Phocoena sinus (vaquita): 116743637
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Entry
116743637 CDS
T07759
Symbol
SAMD4B
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116743637 (SAMD4B)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
116743637 (SAMD4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
116743637
NCBI-ProteinID:
XP_032468224
Ensembl:
ENSPSNG00000021596
UniProt:
A0A8C9ECD7
LinkDB
All DBs
Position
19:complement(12630545..12667064)
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AA seq
695 aa
AA seq
DB search
MMFRDQVGILAGWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCNDIHLLES
EANSAAIVSQWQQESKEKVVSLLLSHLPLLQPGNTEAKSEYMRLLQKVLAYSIESNAFIE
ESRQLLSYALIHPATTLEDRNALALWLSHLEERLASGFRTRPEPTYHSRQGSDEWGGPAE
LGPGEAGPGWQDKPPRENGHVPFHPPSSVPPAINSIGSNANAGLPCQIHPSPLKRSMSLI
PTSPQAPGEWPSPEELGARAAFTTPDHAPLSPQSSVASSGSEQTEEQGSSRNTFQEDGSG
MKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQHLESQNVTKGARHKIALSIQKLRERQ
SVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSVLQATVAAATATTSTAKDGGRGEPP
LPGAEPPLAHPGTDNGSEAKDPPAAEGYPPPPAPAPTDGSEPAPAPVADGDIPSQFTRVM
GKVCTQLLVSRPDEENITSYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLLRTFPRKAA
LEMQNYRQQKGWAFGSNSLPIAGSVGMGVARRTQRQFPMPPRALPPGRMGLLSPSGIGGI
SPRHALTSPSLGGQGRQNLWFANPGGSNSMPSQSRSSVQRTHSLPVHSSPQAVLMFPPDC
PVPGPDLEINPTLESLCLSMTEHALGDGTDKTSTI
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaggtgggcatcctcgctggctggttcaagggctggaatgagtgt
gaacagacagtggccctgctgtcacttctgaagcgggtcacccgcacccaggcccgcttc
ctacagctctgcctggagcactcactggcggactgcaatgacattcacctgctggagtcg
gaggccaacagtgctgccatcgtcagccagtggcagcaggagtccaaagagaaggtggtg
tccctcctgctgtcccacctacccctgcttcagccaggcaacacagaggccaagtcggag
tacatgaggctgctgcagaaagtgctggcctactcgattgagagcaatgccttcatcgag
gagagccgccagctgctctcctatgccctcatccacccggccaccactctggaggaccgc
aatgcgctggccctctggctgagtcacttggaagagcggctagctagcggcttccgcacc
cggcctgagcccacctaccactcacgccagggctcggatgagtggggtggccctgcagag
ctgggccctggggaggcaggaccaggctggcaggacaagccaccccgggaaaatggacac
gtgcccttccacccacccagctcagtgccgccagccatcaacagtattgggagcaacgca
aacgcaggtctcccctgccaaatccaccccagcccgctgaagcgctccatgtcgctcatc
cccacgagcccccaggcccctggtgagtggccaagtccagaggagcttggggcccgggct
gctttcaccacgcccgaccacgcacccctctcgccccagagcagcgtggcctcctctggc
agcgagcagacggaggagcagggctccagccggaacacttttcaggaggacggcagtggc
atgaaagatgtgccctcgtggcttaagagcctccgcttgcacaagtacgcggccctcttc
tcacagatgagctatgaggagatgatgacactgactgagcagcacttggagtctcagaat
gtcaccaaaggtgcccgccacaagatagccctgagcatccagaagctgcgcgagaggcag
agtgtcctcaaatccctggagaaggatgtgctggaaggcgggaatctgcgaaacgctctg
caggagctgcagcagatcatcatcacccccatcaaggcctacagtgtccttcaggccact
gtggctgccgccaccgccaccacctctactgccaaggacgggggccggggggagccaccg
ctgccaggtgcggagcctcccctggctcaccctggcacagacaacggcagtgaggccaag
gaccctccagctgcagagggctacccccctccaccagctccagctcccactgatggcagt
gagccagccccggctcccgtcgctgatggagacatccccagtcagtttacacgggtgatg
ggcaaagtgtgcacccagctgctggtgtcccgaccagacgaggagaacatcaccagttac
ctccagctcatcgaaaagtgcctgactcatgaggctttcacggaaacgcagaagaaacgg
ctgctgtcctggaaacagcaagtgctgaagctcctccggaccttcccgcgcaaagccgca
ctagagatgcagaactaccggcagcagaaaggctgggcattcggctccaactcactcccc
atagctggctctgtggggatgggggtggcccggcggacccagcggcagttcccaatgcct
ccccgggcccttccgcctggcagaatgggccttctgagcccctcgggcattgggggcatc
tcccctcgacatgccctcaccagccccagccttgggggccagggccgacagaacctgtgg
ttcgccaaccctggaggcagcaacagcatgcccagccagagccgcagctctgtgcagcgg
acccactcgctcccggtccactcgtccccccaggccgttctcatgttccctccagactgc
ccggtccctgggcctgacctggagatcaatcccactctggagtctctgtgtctgagcatg
acagaacacgccttgggtgatgggacagacaaaacctccaccatctga
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