Phocoena sinus (vaquita): 116743680
Help
Entry
116743680 CDS
T07759
Symbol
CDH1
Name
(RefSeq) cadherin-1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04015
Rap1 signaling pathway
psiu04371
Apelin signaling pathway
psiu04390
Hippo signaling pathway
psiu04514
Cell adhesion molecules
psiu04520
Adherens junction
psiu05100
Bacterial invasion of epithelial cells
psiu05200
Pathways in cancer
psiu05213
Endometrial cancer
psiu05216
Thyroid cancer
psiu05218
Melanoma
psiu05219
Bladder cancer
psiu05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
116743680 (CDH1)
04390 Hippo signaling pathway
116743680 (CDH1)
04371 Apelin signaling pathway
116743680 (CDH1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116743680 (CDH1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116743680 (CDH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116743680 (CDH1)
09162 Cancer: specific types
05226 Gastric cancer
116743680 (CDH1)
05216 Thyroid cancer
116743680 (CDH1)
05218 Melanoma
116743680 (CDH1)
05219 Bladder cancer
116743680 (CDH1)
05213 Endometrial cancer
116743680 (CDH1)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116743680 (CDH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116743680 (CDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psiu04515
]
116743680 (CDH1)
04090 CD molecules [BR:
psiu04090
]
116743680 (CDH1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
116743680 (CDH1)
Cell adhesion molecules [BR:
psiu04515
]
Cadherins
Major cadherins
116743680 (CDH1)
CD molecules [BR:
psiu04090
]
Proteins
116743680 (CDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
116743680
NCBI-ProteinID:
XP_032468347
Ensembl:
ENSPSNG00000021982
UniProt:
A0A8C9EDB2
LinkDB
All DBs
Position
19:41347888..41455321
Genome browser
AA seq
885 aa
AA seq
DB search
MGPPCRSLSALLLLLLLQVSSWLCQEPESCNPGFGAESYTFTVPRLHLERGRVLGRVSFE
GCTGLPKTVYVSDDTRFKVGTDGVVTVTRPLHLHHPEMSFLVHAWDSTRRKLSTKVTLKA
VVHHHHHHHHHDSPSGTQREVLTFPSSHHGLRRQKRDWVIPPISCPENEKGPFPKALVQI
KSNREKETKVFYSITGQGADTPPLHVFIIERETGWLKVTEPLDREDIAKYILFSHAVSSD
GQAIEEPMEIVITVTDQNDNKPEFTQEVFRGSVMEGALPGTSVMEVSATDADDDVNTYNA
AIAYTILSQEPTLPHNKMFTINRDTGVISVLTTGLDRESFPMYTLVVQAADLQGEGLSTT
ATAVITVNDTNDNPPIFNPTTYVGSVPENEANVVITTLTVTDADVPNTPAWEAVYTILND
NEKQFVVITDPETNEGILKTAKGLDFEAKQQYILYVAVTNVAPFEVTLSTSTATVTVDVM
DVNEAPIFMPPQKKVTVPEDFGLGLEITSYTAQEPDRFMEQKITYRIWRDAANWLEINPD
TGAISTRAELDRENVDHVKNSTYTALIIATDDGSPPATGTGTLLLFLDDVNDNGPIPEPR
IMDFCQRDPQPLIINIIDPDLPPNTSPFTAELTHGASVNWTIEYNDQEHESLLFKPKKTL
ELGDYKINLKLIDNQNKDQVTTLDVHVCDCEGVVSNCQKAGPQAGAGLEVPAILGILGGI
LAFLILILLLLLLIRRRRVVKEPLLPPEDDTRDNIYYYDEEGGGEEDQEYDLSQLHRGLD
ARPEVTRNDVAPTLLSVPQYRPRPANPDEIGNFIDENLKAADSDPTAPPYDSLLVFDYEG
SGSEAASLSSLNSSESDQDQDYDYLNEWGSRFKKLADMYGGGEDD
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgggccctccgtgccgcagcctctctgcgctcctgctgctgctgctgctgcaggtctca
tcgtggctctgccaggagccggagtcctgcaatcccggctttggcgccgagagctacacg
ttcaccgtgccccggctgcacttggagagaggccgagtcctgggcagagtgagttttgaa
ggatgcaccggtctaccaaagacagtctatgtttctgatgacacccgattcaaagtgggc
acagatggcgtggttacagtcacacggcctttacaccttcatcatccagagatgagtttt
cttgtccatgcctgggactccacccgcaggaagctctccaccaaagtgaccctgaaggca
gtagtgcaccaccatcaccaccaccatcatcatgactctccctctggaacccagagagaa
gtgctcacatttcccagctcccaccatggtctcaggagacagaagagagactgggttatt
cctcctatcagctgcccagaaaatgagaaaggcccatttcctaaggctctggttcagatc
aaatctaacagggaaaaagaaaccaaagttttctacagcatcactggccaaggagccgac
acaccccctcttcatgtgtttattattgaaagagaaacaggatggctaaaggtgacagag
cctctggatagagaagatattgccaagtacattctcttctctcatgctgtgtcttcagac
gggcaagcaattgaggagccgatggagattgtgatcaccgtgactgatcagaatgacaac
aagcctgagttcacccaggaggtcttcagagggtctgtcatggagggcgctcttccaggg
acctctgtgatggaggtctcggccacagacgcagacgatgatgtgaacacctacaacgct
gccattgcttacaccatcctcagccaagagcctacgctgccgcacaacaaaatgttcacc
atcaacagggacacgggtgtcatcagtgtgctcaccaccgggctggaccgggagagtttt
cccatgtataccctggtggttcaagctgcagacctgcaaggtgaaggcttaagcacgacc
gcaacagctgtgatcacagtcaatgacaccaatgataaccctcccatcttcaacccaact
acgtacgtggggtcggtgcctgagaacgaggctaacgtggtcatcaccacactcacagtg
accgatgccgatgtccccaataccccagcgtgggaggccgtttacacaatattaaacgat
aacgagaagcagtttgttgtcatcacagacccagaaaccaatgaaggcattttgaagacg
gctaagggcttggattttgaggccaagcagcagtacatcctgtatgtggcagtgactaat
gtggccccctttgaggtcactctctccacttccacagccaccgtcactgtggacgtgatg
gatgtgaatgaagcccccattttcatgcctcctcagaagaaagtgacagtgcccgaggac
ttcggcttgggcctggagatcacatcctacaccgcccaggagccagacagatttatggaa
cagaagatcacgtatcggatttggagggatgctgccaactggctggagattaatccggac
acgggtgccatttccactcgggctgagttggacagagagaacgtcgaccatgtgaagaac
agcacatacacggccctcattatagccactgacgatggttctccacctgctactggaaca
ggaacgctgcttctattcctcgatgatgtgaatgacaatggccccataccagagcctcgg
ataatggacttctgccagagggatccacagcctctcatcatcaacatcattgatcctgat
cttccccccaacacttctcccttcacagcagaactaacacatggggcaagtgtcaactgg
accattgagtacaatgaccaagaacatgaatcactgcttttcaagccaaagaaaacccta
gagttgggtgactacaaaatcaatctcaagctcatagacaaccagaacaaagaccaagtg
accaccttagatgtgcacgtgtgtgactgtgaaggagttgtcagcaactgtcagaaggcc
gggcctcaagctggagcaggattggaagttcccgccattctggggattcttggaggcatt
cttgcttttctgatcctgattctgctgcttctgctacttattcggaggagaagggtagtc
aaagagcccttactgcccccagaagacgacacccgggacaacatttattactatgatgaa
gaaggaggtggtgaagaagaccaggagtatgacctgagccagctacacaggggcctggat
gctcggcctgaagtgactcgcaatgatgtggcgccaaccctcctgagtgtgccccagtat
cgaccccgacctgccaatcctgatgaaattggaaactttattgatgaaaacctgaaggca
gctgatagtgaccccaccgccccaccctatgactctctgctggtgtttgattatgaagga
agcggctccgaagctgctagtctgagctccctgaattcctcggagtcagaccaagaccag
gattatgactacctgaacgaatggggcagtcgcttcaagaagctggcggacatgtatgga
ggcggcgaggatgactag
DBGET
integrated database retrieval system
