Phocoena sinus (vaquita): 116743681
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Entry
116743681 CDS
T07759
Symbol
CDH3
Name
(RefSeq) cadherin-3 isoform X1
KO
K06796
cadherin 3, type 1, P-cadherin
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116743681 (CDH3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psiu04515
]
116743681 (CDH3)
Cell adhesion molecules [BR:
psiu04515
]
Cadherins
Major cadherins
116743681 (CDH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_pro
BACON_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
116743681
NCBI-ProteinID:
XP_032468350
Ensembl:
ENSPSNG00000021931
UniProt:
A0A8C9EDN7
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Position
19:41249555..41347759
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AA seq
826 aa
AA seq
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MGLPSGPLASLLLRFFLLLQAQVYWLPRAASEPCRAGFGEAEVTLEARRAELERSRARGN
VVFTDCPGQESALLTDDDFTVLNNKTVQERKALKISPSKRILRRRKRDWVVPPIFVPENG
KGPFPQKLHQLKSNKDRGTKIFYSITGPGADSPPEGVFTIEKETGWLLLNKPLDREKIAE
YELFGHAVSENGASVEEPMNISIIVTDQNDHKPKFTQDVFRGSILEGVLPGTSVMQVTAT
DEDDAINTYNGVVAYSIHSQEPKDLMFTVHRSTGTISVISSGLDRERVPEYTLTIQATDM
NGDGSSTTAMAIVEILDANDNAPVFEPQQYEARVPENAVGHELQRLTVTDLDAPNSPAWQ
ATYRIVEGDNGDHFTITTHPESNQGILTTKKGLDFEAKNQHTLYVEVINEAPFVVKLPTS
TATIVVHVEDVNEPPVFVPPSKVIEVQEGISIGEPVCTYTARDPDNGSQKISYHILRDPA
GWLAMDPDSGQVTAAGVLDREDEQFVRTNIYEVMVLATDDGSPPTTGTGTLLLTLMDVND
HGPVPEPRQITICNQSPLPQVLNITDKDLSPHTSPFRAQLTHDSDIYWTAEVNEKGDTVA
LSLKKFLKQDTYDVHLSLSDHGNKEQLTVIRATVCDCHGHVETCPERWKGSFLLPILGAV
LALLFLLLVLLFLVRKKRKIKEPLLLPEDDTRDNVFYYGEEGGGEEDQDYDITQLHRGLE
ARPELVLRNDVAPAFIPTPTYRPRPANPDEIGNFIIENLKAANTDPTAPPYDSLLVFDYE
GSGSDAASLSSLTSSASDQDQDYDYLNEWGSRFKKLADMYGGGQDD
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggggctccctagtgggcctctcgcgtccctcctcctccgcttcttcctcttactccag
gcacaggtttactggctgccgcgcgcggcctccgagccgtgccgggcaggcttcggggaa
gctgaagtgaccttggaggcgcgacgcgcggagctggagcggagccgggcgcgggggaat
gtagttttcacggactgccctgggcaagagtcggccctgctgactgatgatgacttcact
gttctgaacaacaaaacagtccaggaaaggaaagcattgaagatctccccatccaaacgt
atcttgcgaagacgcaagagagattgggtggtcccgccaatatttgtccctgagaatggc
aagggtcccttcccccagaagctgcatcagctcaaatctaataaagacagaggcaccaag
attttctacagcatcacggggcctggggcagacagcccccctgagggtgtcttcaccata
gagaaggaaacgggctggttgctgttgaataaaccactggacagggagaaaattgccgag
tatgagctctttggccacgctgtgtcggagaacggtgcctccgtggaagagcccatgaac
atctccatcatcgtaacagaccagaatgaccacaagcccaagttcacccaggatgtcttc
agagggagcatcttggaaggggtactacccggcacttctgtgatgcaggtgacagccacg
gatgaggacgatgccatcaacacctacaatggggtggttgcttattccatccatagtcaa
gagccaaaggacctcatgttcacggtccaccggagcacaggcaccatcagcgtcatctcc
agtggcctggaccgggagagagtccctgagtacacactgacaatccaggctacggacatg
aacggggacggctccagcaccacggctatggccatagtggaaatcctcgatgccaatgac
aacgctcctgtgtttgagccccagcagtacgaggcccgtgtgcctgagaacgcagtgggc
cacgagctgcagaggctgacagtgaccgatctggatgcccccaactcaccggcatggcag
gctacctaccgcatcgtggaaggtgacaacggggaccattttaccatcaccacccaccct
gagagcaaccagggtatcctgacaaccaagaagggcttggatttcgaggccaaaaaccag
cacaccctgtacgttgaagtgatcaacgaggctccctttgtggtgaagctcccaacctcc
acggccaccatagtggtccacgtggaggatgtgaatgagccgcccgtgttcgtcccaccc
tccaaagtcatcgaggtccaggagggcatctccatcggcgagcctgtctgcacctatacc
gcgcgggaccccgacaacgggagtcagaagatcagctaccacatcctgagagacccagca
gggtggctagcaatggacccagacagtgggcaggtcactgctgcaggggtcttggaccgt
gaggatgagcagtttgtgaggaccaacatctacgaagtcatggtcttggccacggatgat
gggagccctcccaccactggcacggggaccctcctgctaacactgatggatgtcaatgac
catggccccgtccctgagccccgtcagatcaccatctgcaaccaaagccctttgcctcag
gtgctgaacatcacagacaaggacctgtccccccacacctcccctttccgggcccagctc
acacacgactcggacatctactggacggcagaggtcaatgagaaaggagacacagtggcc
ttgtccctgaagaagttcctgaagcaagacacatacgacgtgcacctttctctgtccgac
cacggcaacaaggaacagctgacagtgatcagggccaccgtgtgcgactgccatggccac
gtggagacctgccctgaacgctggaaggggagtttcctcctccccatcctgggtgctgtc
ctggctctgctgttcctcctgctggtgctcctgtttttggtgagaaagaaacggaagatc
aaggagccccttctgctcccagaagatgacacccgtgacaacgtcttctactacggcgaa
gaggggggtggcgaggaggaccaggactatgacatcacccaactccaccggggcctggag
gcccggcctgagttggttctccgcaacgatgtggcgccagccttcatccccacacccaca
taccgtccacggccagccaacccagatgaaattggcaacttcatcatcgagaacctgaag
gcggccaacacggaccccacggccccaccctatgactccctgttggtgttcgactatgag
ggcagtggctccgatgccgcctccctgagttcgctcacctcctctgcttccgaccaggac
caagactacgactatctgaatgaatggggcagccgcttcaagaagctggcagacatgtat
ggcgggggccaagacgactag
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