KEGG   Phocoena sinus (vaquita): 116743693
Entry
116743693         CDS       T07759                                 
Symbol
BCAS2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116743693 (BCAS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psiu03041]
    116743693 (BCAS2)
   03400 DNA repair and recombination proteins [BR:psiu03400]
    116743693 (BCAS2)
Spliceosome [BR:psiu03041]
 Complex B
  Other components
   Prp19 complex
    116743693 (BCAS2)
 Complex C
   Prp19-CDC5 complex
    116743693 (BCAS2)
DNA repair and recombination proteins [BR:psiu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    116743693 (BCAS2)
SSDB
Motif
Pfam: BCAS2 HAUS2 THOC7 NOCA1_mid Tup_N OmpH Ribosomal_L29 Transcrip_act INO80F Mua Relaxase_C DUF3450 PRKG1_interact
Other DBs
NCBI-GeneID: 116743693
NCBI-ProteinID: XP_032468381
Ensembl: ENSPSNG00000002254
UniProt: A0A8C9AYV1
LinkDB
Position
1:complement(102313643..102329478)
AA seq 225 aa
MAGTGLVAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSA
FETDIMRNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLRE
MESTWVSLVSKNYEIERTIVQLENELFQMKQQHGEANKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcgggtacgggtttggtggccggagaggttgtggtggatgcgctgccgtattttgac
caaggttatgaagcgcctggtgtgcgggaagcggctgcggcattggtggaggaagaaaca
cgcagataccgacctaccaagaactacctgagctacctgacagccccggattattccgct
tttgaaaccgacataatgagaaatgaatttgaaagattggctgctcgacaaccaattgaa
ttgctcagtatgaaacgatatgaacttccagccccttcctcgggtcagaaaaatgacatt
actgcgtggcaagaatgcgtaaacaattctatggcccagttagagcatcaagcggttcga
attgagaatctggaactaatgtcacagcatggatgcaatgcctggaaagtgtataatgaa
aatctagttcatatgattgaacatgcacagaaagagctccagaagttaaggaaacatatt
caagacttaaactggcagcgaaagaacatgcaactcacagctggatctaaattaagagaa
atggagtcaacttgggtatccctggtcagtaagaattatgagattgaaagaactattgta
caattagaaaatgaactctttcaaatgaagcagcaacatggagaggcaaacaaagaaaac
atacggcaagatttctga

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