Phocoena sinus (vaquita): 116743736
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Entry
116743736 CDS
T07759
Symbol
MAP1LC3B
Name
(RefSeq) microtubule-associated proteins 1A/1B light chain 3B
KO
K10435
microtubule-associated protein 1 light chain
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04137
Mitophagy - animal
psiu04140
Autophagy - animal
psiu04216
Ferroptosis
psiu04371
Apelin signaling pathway
psiu04621
NOD-like receptor signaling pathway
psiu05014
Amyotrophic lateral sclerosis
psiu05022
Pathways of neurodegeneration - multiple diseases
psiu05167
Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
116743736 (MAP1LC3B)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116743736 (MAP1LC3B)
04137 Mitophagy - animal
116743736 (MAP1LC3B)
09143 Cell growth and death
04216 Ferroptosis
116743736 (MAP1LC3B)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116743736 (MAP1LC3B)
09160 Human Diseases
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
116743736 (MAP1LC3B)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116743736 (MAP1LC3B)
05022 Pathways of neurodegeneration - multiple diseases
116743736 (MAP1LC3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116743736 (MAP1LC3B)
03029 Mitochondrial biogenesis [BR:
psiu03029
]
116743736 (MAP1LC3B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psiu04812
]
116743736 (MAP1LC3B)
Membrane trafficking [BR:
psiu04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
116743736 (MAP1LC3B)
Mitochondrial biogenesis [BR:
psiu03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
116743736 (MAP1LC3B)
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
116743736 (MAP1LC3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
116743736
NCBI-ProteinID:
XP_032468508
LinkDB
All DBs
Position
19:57372874..57391015
Genome browser
AA seq
125 aa
AA seq
DB search
MPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNM
SELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPICEVYESEKDEDGFLYMVYASQETFG
MKLSV
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggagaaaaccttcaaacagcgccgaaccttcgaacaaagagtagaagatgtc
cgactcatccgggagcagcatcctaccaaaatcccggtaataatagaacgatacaaaggt
gagaagcagcttccagtcctggataaaacaaagttcctggtgcctgatcatgtcaacatg
agtgagctcatcaagataattagaaggcgcttacagctcaacgctaatcaagccttcttc
ctgttagtgaatggacatagcatggtgagtgtgtccacgccaatttgtgaagtgtatgaa
agcgagaaggatgaagatggattcctgtatatggtatacgcctctcaggagacttttgga
atgaaattgtctgtgtaa
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