Phocoena sinus (vaquita): 116743763
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Entry
116743763 CDS
T07759
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116743763 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psiu04515
]
116743763 (LRRC4B)
Cell adhesion molecules [BR:
psiu04515
]
Immunoglobulin superfamily
NGL family
116743763 (LRRC4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
LRR_1
ig
LRR_9
V-set
Ig_2
LRRNT
DUF7617
Motif
Other DBs
NCBI-GeneID:
116743763
NCBI-ProteinID:
XP_032468590
Ensembl:
ENSPSNG00000019289
UniProt:
A0A8C9CVI6
LinkDB
All DBs
Position
19:6105108..6144140
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AA seq
712 aa
AA seq
DB search
MARARGSPCPPLPPSRMSWPHGALLFLWLFSPPLGAGGGGVAVTSAAAGGSPPATSCPTA
CSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKN
LVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNR
VPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNR
LDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPL
HRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSHFT
CYAPVIVEPPTDLNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGT
LNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVDPVAAGGAGGGGGGPGGGGGGGGS
GGYTYFTTVTVETLETQPGEEALQPRGTEKEPPGPTTDGVWGGGRPGEAAGPASSSTTAP
APRSSRPTEKAFTVPITDVTENALKDLDDVMKTTKIIIGCFVAITFMAAVMLVAFYKLRK
QHQLHKHHGPTRTVEIINVEDELPAASAVSVAAAAAVAGGGGVGGDSHLALPALERDHIN
HHHYVAAAFKAHYSSNPSGGSCGGKGPPGLNSIHEPLLFKSGSKENVQETQI
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgcccgcggctccccgtgccccccactgccgcccagtaggatgtcctggccc
catggggccctgctcttcctctggctcttctccccacccctgggggccggcgggggcggc
gtggccgtgacatctgctgccgcagggggctccccgccggccacctcctgccccacggcc
tgctcctgcagcaaccaggccagccgggtgatctgcacaagaagggagctggccgaggtc
ccggccagcatccccgtcaacacgcggtacctgaacctgcaggagaatggcatccaggtg
atccggacggacacattcaaacacctgcggcacctggagatcctgcagctgagtaagaac
ctggtgcgcaagatcgaggtgggcgccttcaacgggctgcccagcctcaacaccctggag
ctgttcgacaaccggctgacgacagtgcccacgcaggccttcgagtacctgtccaagctg
cgggagctctggctgcggaacaaccccattgagagcatcccgtcgtacgccttcaaccgc
gtgccctcgctgcgccgcctcgacctgggcgagctcaagcggctggagtacatctccgag
gcagccttcgagggcctggtgaacctgcgctacctcaacctgggcatgtgcaacctcaag
gacatccccaacctgacggccctggtgcgcctggaggagctggagctgtcgggcaaccgg
ctggacctgatccgcccgggctccttccagggcctgaccagcctgcgcaagctgtggctg
atgcacgcccaggtggccaccatcgagcgcaacgccttcgacgacctcaagtcgctggag
gagctcaacctgtcccacaacaacctgatgtcgctgccccacgacctcttcacgcccctg
caccgcctcgagcgcgtccacctgaaccacaacccctggcactgcaactgcgacgtgctc
tggctgagctggtggctcaaggagacggtgcccagcaacacgacgtgctgcgcgcgctgc
cacgcgcccgccggcctcaaggggcgctacatcggcgagctggaccagtcgcacttcacc
tgctacgcgcccgtcatcgtggagccgcccacggacctcaacgtcaccgagggcatggcc
gccgagctcaagtgccgcacgggcacgtccatgacctccgtcaactggctgacgcccaac
ggcaccctcatgacccacggctcctaccgcgtgcgcatctctgtcctgcacgacggcacg
ctcaacttcaccaacgtcaccgtgcaggacacgggccagtacacctgcatggtgacgaac
tcggccggcaacaccaccgcctcggccacgctcaacgtctcggccgtggaccccgtggcg
gctggaggcgccgggggcggcgggggcggccccgggggcgggggcggcggcgggggcagc
ggcggctacacctacttcaccacggtgacggtggagaccctggaaacgcagcccggggag
gaggccctgcaaccgcgggggaccgagaaggagccgccggggcccacgacggacggcgtc
tggggcgggggccggccgggggaggcggccggcccggcctcgtcgtccaccacggcaccc
gccccgcgctcctcgcgccccacggagaaggcgttcacggtgcccataacggacgtgacg
gagaacgccctcaaggacctggacgacgtcatgaagaccaccaagatcatcatcggctgc
ttcgtggccatcacgttcatggccgccgtgatgctcgtggccttctacaagctgcgcaag
cagcaccagctccacaagcaccacgggcccacgcgcacagtggagatcatcaacgtggag
gacgagctgcccgccgcctccgccgtgtccgtggccgccgccgccgctgtggccggcggg
ggtggcgtgggcggggacagccacctggccctgcccgccctggagcgcgaccacatcaac
caccaccactacgtggcggccgccttcaaggcgcactacagcagcaaccccagtggcggg
agctgcgggggcaagggtccgcccggcctcaactccatccacgaacctctgctcttcaag
agcggttccaaggagaacgtgcaagagacgcagatctga
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