Phocoena sinus (vaquita): 116743802
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Entry
116743802 CDS
T07759
Symbol
NR1H2
Name
(RefSeq) oxysterols receptor LXR-beta isoform X1
KO
K08535
liver X receptor beta
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04148
Efferocytosis
psiu04931
Insulin resistance
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116743802 (NR1H2)
09160 Human Diseases
09167 Endocrine and metabolic disease
04931 Insulin resistance
116743802 (NR1H2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116743802 (NR1H2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
psiu03310
]
116743802 (NR1H2)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116743802 (NR1H2)
Nuclear receptors [BR:
psiu03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
116743802 (NR1H2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
116743802
NCBI-ProteinID:
XP_032468701
Ensembl:
ENSPSNG00000019941
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Position
19:complement(6241716..6248126)
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AA seq
473 aa
AA seq
DB search
MSPAPHWCSERGGTWREVLLRDPTMSTPATSSLDTPLPGNGPSTPSSSPDGKEDGPEPCP
GADPDVPGTDGANSASVVVILDTAEEPERKRKKGPAPKMLGDELCQVCGDTASGFHYNVL
SCEGCKGFFRRSVIRGGAGRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSK
EQIRKKKIRKQQQQSSPTGLGVGSSSASGPGASPGGSDGGGQGSGEGEGVQLTAAQELMI
QQLVAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQ
VPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVE
FINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPSRVEALQQPYVDALLSYTR
IKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgccccccactggtgttcggagaggggcgggacctggagagaggtgctgctc
cgtgaccccaccatgtccacccccgccacgagttccctggacacccccttgcctggaaat
ggccctagcaccccctcttcttcacctgatggaaaggaggatggccctgagccgtgccca
ggggcggatcctgatgtcccaggcactgatggggccaactcagcttccgtcgtggtcatc
ctagacacagcagaggagccggagcgcaagcgaaagaagggtccggctccaaagatgctg
ggcgacgagctgtgccaggtgtgcggggacacggcctctggcttccactacaatgtgctc
agctgcgaaggctgcaagggcttcttcaggcgaagtgtgatccgaggcggggccgggcgc
tatgcctgccggggcggtggaacctgccagatggatgccttcatgcggcgcaagtgccag
caatgccggctgcgaaaatgcaaggaggctgggatgcgggagcaatgtgtcctctccaaa
gaacagatccggaagaagaagatccggaagcagcagcagcagtcgtcacccacagggctg
ggagtcggcagcagctcagcctctgggcctggggcctctcccggagggtctgacgggggt
ggccagggctccggggaaggcgagggtgtccagttaacagccgctcaggaactaatgatc
cagcaattggtggcggcccagctgcagtgcaataaacgctccttctctgaccagcctaaa
gtcacgccctggcccttgggcgcagacccgcagtcccgtgatgctcgccagcagcgtttc
gcccacttcacggagctggccatcatctcagtccaggagatcgtggacttcgccaagcag
gtgcctggcttcctgcagctgggtcgcgaggaccagatcgccctcctgaaggcatctacc
attgagatcatgctgctggagacagccagacgctacaaccacgagaccgagtgcatcacg
ttcctgaaagacttcacctacagcaaggatgacttccaccgcgcaggcctgcaggtggaa
ttcatcaaccccatcttcgagttctcgcgggccatgaggcgcctgggcctggacgatgct
gagtacgccctcctcatcgccatcaacatcttctcggccgaccggcccaacgtgcaggag
ccgagccgagtcgaggcgctgcagcagccctacgtggacgcgctgctgtcctacacccgc
atcaagaggccacaggaccagctgcgtttcccccgcatgctgatgaagctcgtgagcctg
cgcacgctcagctccgtgcactcggagcaggtcttcgccctgcggctccaggacaagaag
ctgccgcctttgctctccgagatctgggacgtccatgaatga
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