Phocoena sinus (vaquita): 116743873
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Entry
116743873 CDS
T07759
Symbol
IRF6
Name
(RefSeq) interferon regulatory factor 6 isoform X1
KO
K10154
interferon regulatory factor 6
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116743873 (IRF6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116743873 (IRF6)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
116743873 (IRF6)
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116743873 (IRF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
116743873
NCBI-ProteinID:
XP_032468867
Ensembl:
ENSPSNG00000012250
UniProt:
A0A8C9C237
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Position
1:148056275..148072832
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AA seq
467 aa
AA seq
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MALHPRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAW
AVETGKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQ
GSIINPGSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFLNINGSPIAPASVGN
CSVGNCSPEAVWPKTEPLEMEVPQTPIQPFYSSPELWISSLPMTDLDIKFQYRGKEYAQT
MTVSNPQGCRLFYGDLGPMPDQEELFGPVSLEQVKFPGPEHITNEKQKLFTSKLLDVMDR
GLILEVSGHAIYAIRLCQCKVYWSGPCAPSLVAPNLIERQKKVKLFCLETFLSDLIAHQK
GQIEKQPPFEIYLCFGEEWPDGKPQERKLILVQVIPVVARMIYEMFSGDFTRSFDSGSVR
LQISTPDIKDNIVAQLKQLYRILQTQESWQPMQPTPSMQLSPALPAQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggctctccacccccgcagagttcggctgaagccctggttggtggcccaagtggatagt
ggcctgtaccctgggctcatctggctacatagggactccaaacgcttccagattccctgg
aaacatgccacccggcatagcccccaacaagaggaggaaaataccattttcaaggcctgg
gctgtggagacagggaagtaccaggaaggggtggatgaccccgacccagctaaatggaag
gcccagctccgctgtgcgctcaacaagagcagggaattcaacctgatgtacgacggcacc
aaggaggtgcccatgaacccagtgaagatatatcaagtgtgtgacatcccccagccccag
ggctctatcattaacccaggatccactggatctgctccttgggatgagaaagataatgat
gtggatgaagaagatgaggaagatgagctggaccagtcacagcaccacgttcccatccag
gacaccttccccttcctgaacatcaatggttctcccatagcaccagccagtgtgggcaac
tgcagtgtgggcaactgcagccccgaagcagtgtggcccaaaacggaacctctggagatg
gaagtaccccagacacctatacagcctttctatagctctccagagctgtggatcagctct
ctcccaatgactgacctggacatcaaatttcagtaccgtgggaaggagtatgcacagacc
atgacggtgagcaacccccagggctgcaggctcttctacggagacttgggtcccatgcct
gaccaggaggagctctttggtcccgtcagcctggagcaggtcaagttcccaggtccggag
cacatcaccaatgagaagcagaagctgttcaccagcaaactgctagacgtcatggacaga
ggactgatcctggaggtcagcggtcatgccatctatgctatcaggctgtgccagtgcaag
gtgtactggtctgggccatgtgccccgtcgcttgttgcccccaacctgatcgagagacaa
aagaaggtcaaactcttttgtctggaaacgttccttagtgatctcattgcccaccagaaa
ggacagatagagaaacagccaccatttgagatctacttatgctttggggaagagtggcca
gatgggaaacctcaggaaaggaaactcatcttggttcaggtcattccagtggtggcccgg
atgatctatgagatgttttctggtgatttcacacgatcctttgacagtggcagtgtccgc
ctgcagatctcaactccagacatcaaggataacattgttgctcagctgaagcagctgtac
cgcatcctgcaaacccaggaaagctggcagcccatgcagcccacccccagcatgcaactg
tcccctgccctgccagcccagtaa
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