Phocoena sinus (vaquita): 116743919
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Entry
116743919 CDS
T07759
Symbol
AP1G1
Name
(RefSeq) LOW QUALITY PROTEIN: AP-1 complex subunit gamma-1
KO
K12391
AP-1 complex subunit gamma-1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04142
Lysosome biogenesis
psiu05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
116743919 (AP1G1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
116743919 (AP1G1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116743919 (AP1G1)
Membrane trafficking [BR:
psiu04131
]
Endosome - Golgi transport
Others
AP-1 complex
116743919 (AP1G1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
Ltn1_1st
DUF5609
Terminase_2
Motif
Other DBs
NCBI-GeneID:
116743919
NCBI-ProteinID:
XP_032468950
Ensembl:
ENSPSNG00000014777
LinkDB
All DBs
Position
19:44670294..44751276
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AA seq
827 aa
AA seq
DB search
MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLG
YPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQG
LALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATK
NLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHDV
SGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIM
DIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDL
DVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRW
HIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAA
WCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTRF
TCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRSALLERMPVMEKVTTNGPTE
IVQTNGETEPAPLETKPPPSGPQPTSQANDLLDLLGGNDITPVIPTAPTSKPASAGGELL
DLLGDINLTGAPAAAPPSRPCLVPQIXQPPFLLDGLSSQPLFNDIATGIPSITAYSKNGL
KIEFTFERSNTNPQCHSDNDTGLHSTELDMTDFVFQAAVPKTFQLQLLSPSSSIVPAFNT
GTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgccagcccccatcagattgcgggagctgatccggaccatccggacagcccgaacccaa
gccgaagaacgagaaatgatccagaaagaatgtgctgcaattcggtcatcttttagagaa
gaagacaatacataccggtgtcggaatgtggcaaaattactatatatgcacatgctgggc
taccctgctcactttggacagttggagtgcctcaagcttatcgcctctcaaaaattcaca
gacaaacgcattggctatttaggggcaatgctgctgttagatgaaagacaagatgtccat
cttctcatgaccaactgtatcaagaatgatcttaatcatagcacgcaatatgtacagggg
ctagcactttgtaccctcggctgcatgggctcctcagagatgtgcagagatcttgcagga
gaggtagagaaactcctgaaaacctccaactcttacttaagaaaaaaggcagcactttgt
gctgttcatgtcatcaggaaggttcctgaacttatggagatgttcttaccagcaacaaaa
aatttattgaatgaaaagaaccatggtgtccttcacacttctgtagtcctcctcacagaa
atgtgtgagcgaagcccagacatgcttgcacatttcagaaagaatgaaaagcttgtgccc
cagttagttcgtattctaaagaacctcatcatgtccggatattcaccagaacatgatgtt
tctgggatcagtgacccctttttgcaggtacgaattttgcggttattaagaattttagga
cgaaatgatgatgactcaagtgaagctatgaatgatatattagcacaggttgccactaat
acggagactagtaaaaatgtaggaaatgctattctttatgaaacggttttgactatcatg
gatattaagtcagagagtggactgcgagtcctagccataaatatcctgggtcgtttctta
ttgaacaacgacaagaatattagatatgtagctttaacatctttgttgaagactgtgcag
acagatcataacgcagtacagaggcacagaagtaccattgtggactgtctaaaagatttg
gatgtctcaataaaacggcgtgcaatggaattgagttttgccctggtaaatgggaataat
attcgaggcatgatgaaggaattgctttattttctggattcatgtgagccagaatttaaa
gcagactgtgcatctggaatcttccttgctgcagaaaagtatgcaccttccaaacggtgg
catatagacacaattatgcgcgttctgacaacggcaggaagctatgttcgtgatgatgca
gttcccaacttgatccagttaataaccaatagtgtggagatgcatgcctatactgtccag
cgcttgtacaaagcaattcttggtgattattctcagcaacctttggtgcaagtagctgcc
tggtgtataggtgaatatggagatcttcttgtgtctggccaatgtgaagaggaagagcct
attcaggtaacagaggatgaagtgttggatattttagaaagtgtcctaatctctaatatg
tccacctcagtgacacgaggttatgccctcactgccattatgaagctttctactcgattc
acctgtactgtaaaccgaattaagaaagtggtttccatctatggaagcagcattgatgtg
gagctccagcagagggcagtagaatataatgcactttttaagaaatatgaccatatgagg
tctgctctgcttgagagaatgcctgtcatggaaaaagtaaccacaaatggccctactgag
attgtgcagacaaatggagagacagaaccagctcctctagagaccaagccaccaccctct
gggccacagcccaccagccaggccaatgatttattggatttgttgggaggaaatgacata
acacccgttattccaactgcacctacaagcaaaccagcttctgctggtggagaacttctt
gatttgctgggagacatcaaccttacaggtgctccagctgctgctccaccctcccgcccc
tgcctcgtcccacagatantccagccccccttcttgttggatgggctttcatcacaacct
ctcttcaatgacattgctacaggcatcccctccatcacagcatacagtaagaatggcttg
aagatagaattcacctttgaacggtcaaacaccaacccccagtgtcacagtgataacgat
acaggcctccacagcacagagctggacatgacggactttgttttccaggctgcagtacca
aagacattccagctgcagcttctgtctcctagcagcagcatcgtcccagcatttaatacg
gggaccatcacacaagtcattaaagttctgaacccacagaagcaacagctgcgaatgcgg
atcaagctcacatataatcacaagggctcagcaatgcaagatctagcagaggtgaacaac
tttccccctcagtcctggcaatga
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