KEGG   Phocoena sinus (vaquita): 116743955
Entry
116743955         CDS       T07759                                 
Symbol
PNKP
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase isoform X1
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    116743955 (PNKP)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:psiu01009]
    116743955 (PNKP)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psiu03400]
    116743955 (PNKP)
Enzymes [BR:psiu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     116743955 (PNKP)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     116743955 (PNKP)
Protein phosphatases and associated proteins [BR:psiu01009]
 HAD phosphatases
  Other HAD phosphatases
   116743955 (PNKP)
DNA repair and recombination proteins [BR:psiu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     116743955 (PNKP)
SSDB
Motif
Pfam: PNK3P AAA_33 FHA_2 Zeta_toxin HAD Viral_helicase1 TSP1_spondin NIF AAA_17
Other DBs
NCBI-GeneID: 116743955
NCBI-ProteinID: XP_032469067
Ensembl: ENSPSNG00000021112
LinkDB
Position
19:6598015..6608764
AA seq 553 aa
MARVEAQGRLWLESPPGGAPPIFLPLGGQALVLGRGPLTQVTDRKCSRNQAPYCGLKLAM
LPSKEGSSHTRIQILTPPPQSSVELVADPETRTVAVKQLGVNPSTAGTQELRTGLEGSLG
VGDTLYLVNGLHPLTLRWEEAHTPESQPDTPPGTPPVAPEEEEEDEQQKKRIRKSSPGWE
SFQKLLVFTAPGVKPRGKVAGFDLDGTLITTRSGKVFPTGPSDWRILYREIPQKLRELAA
EGYKLVIFTNQMGIGRGKLPAEEFKAKVEAVVEKLGVPFQVLVATHAGLYRKPVIGMWDH
LQGQANQGVPISIGDSVFVGDAAGRPANWAPGRKKKDFSCADRLFALNLGLPFATPEEFF
LKWPMARFELPAFDPRTVSCSGPLCLPESSSLLSSDPEVVVAVGFPGAGKSTFIQEHLVS
AGYVHVNRDTLGSWQRCVTTCEVALKQRKRVVIDNTNPDIQSRARYIKCARDAGVPCRCF
LFSTTLEQARHNNRFRDMTDSSHVPVTDIVIYGYRKQLEAPTLAEGFSAVLEIPFRIHVA
PQLERLYRQFSEG
NT seq 1662 nt   +upstreamnt  +downstreamnt
atggccagggtggaggcccagggccgcctgtggctggagagcccccctggaggagcgcct
cccatcttcctgcccttgggtgggcaagccctggtgctgggccgaggacccttgacgcag
gttaccgaccggaagtgctccagaaaccaagccccatactgtggtctgaagctggccatg
ctccccagtaaggagggaagcagtcacacaaggattcaaatcctgactccaccccctcaa
tcctcagtggagctggtcgctgaccctgagactcggacggtggcagtgaaacagctggga
gttaacccctcaactgccgggactcaggagctgagaacagggttggagggttctctgggg
gtgggggacacgctgtatttggtcaatggcctccacccgctgaccctgcgctgggaagag
gctcacacgccagaatcccagccagacactccaccaggcacccctcctgtggccccggag
gaggaggaggaggatgaacagcagaaaaagcggataaggaagtcatcccctggctgggag
agcttccagaagctgctagtgttcacggcacctggtgtgaagccccggggcaaggtggcc
ggttttgatctggatgggaccctcatcaccacacgttctgggaaggtctttcccactggc
cccagtgactggaggatcttgtaccgagagattccacagaagctccgggaactggccgcc
gagggttacaagctggtgatcttcaccaaccagatgggcattggacgcgggaagctgcca
gcggaggagttcaaggccaaggtggaggctgtggtggagaagctgggggtcccctttcag
gtcttggtggccacgcacgcaggcttgtaccggaagccggtgatcggcatgtgggaccac
ctgcaggggcaggccaaccagggcgtgcccatctccatcggggacagcgtctttgtggga
gatgcagctggacgcccagccaactgggcccctgggcgcaagaagaaagacttctcttgc
gctgaccgcctgtttgccctcaacctgggcctgcccttcgccacgccagaggagttcttt
ctgaaatggcccatggcccgcttcgagctcccagcctttgacccgaggaccgtctcctgc
tctgggcctctctgcctccctgagtccagctccctcttaagctcagaccccgaggtggtt
gtcgccgtgggatttcctggggctgggaagtccaccttcatccaggagcatctcgtgtcg
gccggatacgtccacgtgaacagggacactctgggctcgtggcagcgctgcgtgaccacg
tgcgaggtggccctgaagcaaaggaaacgggtcgtgattgacaacacgaacccggacatc
cagagccgagccaggtacatcaagtgtgcccgagacgcaggcgtcccctgccgctgcttc
ctcttcagcaccaccctggagcaggcacgccacaacaaccggttccgggacatgacggac
tcctctcacgtccccgtgaccgacatcgtcatttacggctacaggaagcagctcgaggcc
cccacactggccgaaggcttctctgccgtcctggagatcccgttccggatccacgtggcg
ccgcagctcgagcggctgtaccgccagttctcagagggctga

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