Phocoena sinus (vaquita): 116743969
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Entry
116743969 CDS
T07759
Symbol
USB1
Name
(RefSeq) U6 snRNA phosphodiesterase isoform X1
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116743969 (USB1)
Spliceosome [BR:
psiu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
116743969 (USB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HVSL
Motif
Other DBs
NCBI-GeneID:
116743969
NCBI-ProteinID:
XP_032469098
Ensembl:
ENSPSNG00000022103
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Position
19:32050621..32070928
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AA seq
265 aa
AA seq
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MSAAPLVGYSSSGSEDEAEAGARVRPGTRGCSRGQSPLPSQKLPVPDSVLDMFPGTEERP
ADDSAKHGGRVRTFPHERGNWATHVYVPYEAREEFLDLLDVLLPHAQTYVPRLVRMEAFH
LSLSQSVVLRHHWILPFVQALKDRVASFQRFCFTADRVKIYTNQEKTRTFVGLEVTSGHT
QFLDLVSEVDRVMEEFDLTTFYQDPSFHISLAWCVGDAHLQLEGQCLRELQEIVGEFEDS
QTLLRAHAEQIRCKSGNKFFSMPLK
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggcgcccctggtgggctacagcagcagcggctccgaggatgaggctgaggcc
ggggcccgggtccggccggggactagaggctgcagtcggggccagagcccccttcccagc
cagaagttgccagtacccgacagtgtgctggacatgttcccaggcaccgaggagaggcct
gcggatgatagcgcaaaacatgggggccgggtgcgcacctttccccacgagcggggcaac
tgggccacccacgtctatgtaccatatgaagccagggaggagttcctggacctgcttgac
gtgctgctgccccacgcacagacatacgtcccccggctggtaaggatggaggccttccac
ctcagcctgtcccagagcgtggttctgcgccatcactggatcctccccttcgtgcaggct
ctgaaagaccgcgtggcctccttccagagattctgctttactgccgaccgggtaaagatt
tacaccaatcaagagaagaccaggacctttgttggactcgaggtcacctcgggacacacc
caattcctggacctggtttcagaggtggacagggtcatggaggagtttgacctcaccact
ttctaccaggacccctcattccacatcagtctggcctggtgcgtgggtgatgcacatctc
cagctggaagggcagtgcctacgggaactacaggaaatcgtgggtgagtttgaagactcc
cagacgttgctgcgtgcgcacgccgagcagatccgctgcaagtctgggaacaaattcttc
tcgatgcctctgaagtga
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