KEGG   Phocoena sinus (vaquita): 116743989
Entry
116743989         CDS       T07759                                 
Symbol
TAF12
Name
(RefSeq) transcription initiation factor TFIID subunit 12 isoform X1
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    116743989 (TAF12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psiu03021]
    116743989 (TAF12)
   03036 Chromosome and associated proteins [BR:psiu03036]
    116743989 (TAF12)
Transcription machinery [BR:psiu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     116743989 (TAF12)
   Coactivators
    SAGA/TFTC/STAGA complex
     116743989 (TAF12)
Chromosome and associated proteins [BR:psiu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     116743989 (TAF12)
    STAGA complex
     116743989 (TAF12)
    TFTC complex
     116743989 (TAF12)
    SAGA complex
     116743989 (TAF12)
    SLIK complex
     116743989 (TAF12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa CENP-T_C TAF4 TAF10 DUF5827
Other DBs
NCBI-GeneID: 116743989
NCBI-ProteinID: XP_032469167
Ensembl: ENSPSNG00000006469
UniProt: A0A8C9BLC4
LinkDB
Position
1:complement(22536474..22562435)
AA seq 213 aa
MAASRFTGLTAVADVIKDLDTQIALIGLGPHSSKKKQDLDKLYELKSKARQIMNQFGPSA
LINLSNFSSIKPEPASTPPQGSMANSTTVVKIPGTPGTGGRLSPENNQVLTKKKLQDLVR
EVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMWI
PGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq 642 nt   +upstreamnt  +downstreamnt
atggctgcctctcgtttcaccgggctcacagccgttgctgatgtaattaaagatctagac
acccagatagctttgattggccttggtcctcatagctccaaaaagaaacaagatcttgat
aagctctatgagctgaagtccaaagcgcggcagattatgaaccagtttggcccctcagcc
ctaatcaacctgtccaatttctcatcaataaaaccggaaccagctagcacccctccacaa
ggctccatggccaatagcactacagtggtaaagatcccaggcactcctgggacaggaggg
cgtctcagccctgaaaacaatcaggtattgaccaagaagaaattacaagacttagtaaga
gaagtggatcctaatgagcaactggatgaagatgtggaggagatgctgctgcagattgct
gatgattttatcgagagcgtggtgacagcagcatgccagcttgctcggcatcgcaagtcc
agcaccctggaggtgaaagatgtccagctgcatctagaacgccagtggaacatgtggatc
ccagggtttggctctgaagaaatacgaccctacaaaaaagcttgcaccacagaagctcac
aaacagagaatggcattgatccggaaaacaaccaagaaataa

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