Phocoena sinus (vaquita): 116743999
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Entry
116743999 CDS
T07759
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03040
Spliceosome
psiu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116743999
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116743999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116743999
03041 Spliceosome [BR:
psiu03041
]
116743999
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116743999
mRNA cycle factors
Common to processing body (P body) and stress granule
116743999
Spliceosome [BR:
psiu03041
]
Common components
Common spliceosomal components
hnRNP proteins
116743999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
116743999
NCBI-ProteinID:
XP_032469175
LinkDB
All DBs
Position
19:4810097..4824094
Genome browser
AA seq
424 aa
AA seq
DB search
MRATCWQKQLFIETTFNLLGGKHLFPTSVAHTSPVAARPEPAPGSPAWSLRTHFPPEPET
GYTCWRSRYEVFLLWCKYVLRCSPYSAFRVLGVTINLTPQRLALRPSKSRRCYREALQKL
FIGGLSFETTDECLRSHSEQRGMLTHCVATRDPNTKRCRGFGVVTYATVEEVDAVMNARP
HKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDAEEHHLRDYFEQYGKTEVTEI
MTDQGSGKKRGFAFVTFDDHDSVDKTVSQKYHTVNGHNCDVRKALSKQEMASSSSSQRGR
SGSGNFGGGCGGGFGANDRFGRGGDFSGRGAFGGSRGGGGYGGSGDGYNGFGNDGSHFGG
GGSYNDSGSYNKQSANFGPMKGGNSGGRSAGPCGGGDQYFAKPQNQGGCGGSSSSRSCGG
GRRF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcaacctgctggcaaaaacagctgtttattgaaaccacttttaacttgttggga
gggaaacatctgtttcccacatcagtggcccacacatctccagtagcggcccgccctgaa
cccgcccccggaagtcccgcctggtcccttcggacgcactttcctcctgagccggaaacg
gggtacacgtgttggaggtctcgctacgaagtatttctactttggtgtaagtatgtgctg
cgctgttccccgtattctgccttcagggtcttgggagtgactatcaaccttacaccccag
cgcctggccctccggccgagtaaatccagacgctgttacagggaagccctgcagaagctc
ttcatcggaggtttgagctttgaaacaactgatgagtgtctgaggagccattctgagcag
cggggaatgctcacacattgtgtggcaacgagggatccaaacaccaagcgctgcagaggc
tttggggttgtcacctatgccactgtggaggaggtggatgcagtcatgaatgcaaggcca
cacaaggtggatggaagagttgtggaaccaaaaagggccgtctcaagagaagattctcaa
agacctggtgcccacttaactgtgaaaaagatttttgttggtggcattaaagaagatgct
gaagaacatcacctaagagattattttgaacagtatgggaaaactgaagtgactgaaatc
atgactgaccaaggtagtggcaaaaagagaggctttgctttcgtaacctttgatgaccat
gactctgtagacaagactgtcagtcagaaataccacacggtgaatggccacaactgtgac
gtaaggaaagccctatctaagcaagagatggctagttcctcatccagccaaagaggtcga
agtggttctggaaactttggtggtggttgtggagggggttttggtgcgaatgacaggttt
ggtcgtggaggagacttcagtggccgaggtgcctttggtggcagccgtggtggcggggga
tatggtggcagtggggatggctataatgggttcggtaatgatggaagccattttggaggt
ggtggaagctacaatgattctggcagttacaacaaacaatctgcaaattttggacccatg
aaaggaggaaactctggaggcagaagtgctggcccctgtggtggtggagaccaatacttt
gccaaaccacaaaaccagggtggctgtggcggttccagcagcagcaggagctgtggtggg
ggcagaaggttttaa
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