Phocoena sinus (vaquita): 116744076
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Entry
116744076 CDS
T07759
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116744076 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psiu01007
]
116744076 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psiu03016
]
116744076 (KARS1)
Enzymes [BR:
psiu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
116744076 (KARS1)
Amino acid related enzymes [BR:
psiu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
116744076 (KARS1)
Transfer RNA biogenesis [BR:
psiu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
116744076 (KARS1)
Prokaryotic type
Other AARSs
116744076 (KARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
116744076
NCBI-ProteinID:
XP_032469277
Ensembl:
ENSPSNG00000014000
UniProt:
A0A8C9CC45
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Position
19:complement(47313184..47327763)
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AA seq
625 aa
AA seq
DB search
MLTQAAVRLVRGSLRQTSWAQWGQRELRLCQLARFTTIHKDKPLFDKRSELKRRLKAEKK
IAEKEAKQKELSEKQLSQAAAAATSHTADNGVGAEEESLDPNQYFKIRSQAVHQLKVNGE
DPYPHKFHVDISLTHFIQEYSHLQPGEHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGV
KLQVMANSRNYKSEEEFIRINNKLRRGDIIGVQGNPGKTKKGELSIIPYEVTLLSPCLHM
LPHLHFGLKDKETRFRQRYLDLILNDFVRQKFIIRSKIITYIRHFLDELGFLEIETPMMN
IIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRIYEIGRQFRNEGIDLTHN
PEFTTCEFYMAYADYHDLMEITEKMISGMVKHITGSYKVTYHPDGPEGQACEIDFTPPFR
KISMVEELEKALGTKLPETKLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFL
EVTCINPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMRKEICNAYTELNDPVRQRQLF
EEQAKAKAAGDDEAMFIDETFCTALEYGLPPTGGWGMGIDRVTMFLTDSNNIKEVLLFPA
MKPEDKKENVATTDGLESTAAGTSV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgcaagctgctgtaaggcttgttagggggtccctgcgccaaacgtcctgggca
cagtgggggcagagggagctgcgcctgtgtcaacttgctcgtttcacaacgattcacaag
gacaagccactttttgataaaagaagtgagctaaagagacgcctgaaagctgagaagaaa
atagcagagaaggaggccaagcagaaggagctcagtgagaaacaactaagccaggccgct
gctgctgccaccagccacactgctgataatggtgtgggtgcggaggaggagagcttggac
ccaaaccaatacttcaaaatccgcagccaagcagtccaccagctgaaggtcaatggggaa
gacccatacccacacaagttccacgtcgacatctcgctcactcactttatccaagaatac
agtcacctgcagcctggggagcacctgactgacatcaccttaaaggtggcaggtaggatc
catgccaaaagagcttctgggggaaagctcatcttctatgaccttcgaggagagggggtc
aagttgcaagtcatggccaattccaggaattataaatctgaagaagaatttattcgtatt
aacaacaaactgcgccggggagacataattggagttcagggcaatcctgggaaaaccaag
aagggcgagctgagcatcattccctatgaagtcacactgctgtctccttgcttgcatatg
ttacctcatcttcactttggcctcaaagacaaggaaacacggtttcgtcagagatacttg
gacttgatcctgaatgactttgtgaggcagaagtttatcatccgctctaagatcatcaca
tacataaggcatttcttggatgagttgggattcctagagattgaaactcccatgatgaac
atcatcccagggggagctgtggccaagccttttatcacctaccacaacgagctggacatg
aatttatatatgaggattgctccagaactctaccataagatgctggtggttggtggcatt
gaccggatttatgaaatcggacgccagttccggaatgaaggaattgatctgactcacaat
cctgagttcaccacctgtgaattctacatggcctatgcagactatcatgatctcatggaa
atcacagagaagatgatttcagggatggtgaaacacattacaggcagttacaaggtcacc
tatcatccagatggcccagagggccaagcctgtgagattgacttcaccccacccttccgg
aaaatcagcatggtcgaagagctggagaaagccctgggcacgaagctgccagaaactaag
ctcttcgagacggaagaaactcgcaaaattctagatgatatctgtgtggcaaaagctgtt
gaatgccctccacctcggacgacagccaggctccttgataagcttgttggggagttcctg
gaagtgacgtgcatcaatcctacgttcatctgtgatcacccgcagataatgagtcctctg
gccaaatggcaccgctctaaagagggtctgactgaacgctttgagctatttgtcatgaga
aaggaaatatgcaatgcctacactgagctgaatgaccctgtgcgacagcggcagcttttt
gaagaacaggccaaggccaaagctgctggcgatgatgaggccatgttcatagatgaaacc
ttctgcactgccctggaatatgggctgcccccgacaggtggctggggcatgggcatcgac
cgcgtcaccatgtttctcacagactccaataacatcaaggaagtgcttctgtttcctgcc
atgaaacccgaagacaagaaggagaatgtagccaccactgatggactggaaagcacagca
gccggcacttctgtctag
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