Phocoena sinus (vaquita): 116744186
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Entry
116744186 CDS
T07759
Symbol
GSE1
Name
(RefSeq) genetic suppressor element 1 isoform X1
KO
K27276
genetic suppressor element 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116744186 (GSE1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
116744186 (GSE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3736
YabA
Motif
Other DBs
NCBI-GeneID:
116744186
NCBI-ProteinID:
XP_032469460
Ensembl:
ENSPSNG00000020556
LinkDB
All DBs
Position
19:55643129..56063738
Genome browser
AA seq
1923 aa
AA seq
DB search
MYWLKRPHQCDAGAGGRRGGAGAPREWNVAYALGAAAGDEDDDDGGSGGGPGPRAAAEEP
RDSELSELSDTDPLSEPDPAARDAASPHQHGAPAARAAPGPGPRGGRCPEWRLAPGPSPG
RGAETTAPRDVEKEEVPSNLRVDGEPKAGIRRRRKGHGRHWVPEARASVLRGIQDPWQGP
AVQVAPAESMRGASSGRAAKTPESRPLGETCGGCCVSEDSDVNITSEEEGHQEEPSSGPR
GPGDTENDGGRVPRAPLLESRAAPPEGLCCYICGSALSPASQHQIHVQKQEKLAQAPFFP
FLWLHSPPPGAQPISEGGSTLVCPCCFSSLMQQWQSFELADVPVLQRLYVVPLNSHAPGM
ASKGRRLPREEGPPAGALPEACYLCGEDCTQDARAVASRMLNGNTRGSMHFPFLSLLPCP
PNAQGPNKRCEVRSCPKCFSVLEDVWALYRACQNEELITSVQGFLGRYHQAFSASDPALS
EPPASAQGSPASICYICGAELGPGKEFQLNVNPSSRLGEKEPFFPFLTVYPPAPRARPAD
STGLVATCVLCYHDLLGQWLQHEARGTQHAVSPWSRQYQVETFVCFFCRQEKKRCLGLKA
VRVARLPLFLYTLRASHSLVVDDGRQLIIGACTECGTLVCAGQGLTRQGPMGWSSPVAAA
RKVTSASLEASTAVHPPSREPEPRPGAPAESLPRGPRTSQEQGPARCQQSSLDGAGPELT
GTGMSHEPKSPSLGMLSTATRTTATVNPLTPSPLNGALVPSGSPATSSALSAQAAPSSSF
AAALRKLAKQAEEPRGSSLSSESSPVSSPATNHSSPASTPKRVPMGPIIVPPGGHSVPST
PPVVTIAPTKTVNGVWRSESRQQDAGSRGSGSGRERLIVEAPLPQEKAGGPAIPSHLLST
PYPFGISPSSVVQDSRFPPLNLQRPVHHVVPPSTVTEDYLRSFRPYHTTEDLRVSSLPPL
GLDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIPTPGSLPPLHPSAMHL
HLSGVRYPPELSHSSLAALHSERMSSLSAERMQMDEELRREREREREREADREREKERER
EREKEREREKELERERELERQREQRAREKELLAAKALEPAFLPVAELHGLRSHAAEERGK
ASEQLTPTRAEKLKDAGLQAPKPVQHPLHPAAAPHHPVPGLLSTHGLFSLPGSSAATALL
LQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLEQHLDLGRPPAPADAEHRPESARP
GPNRHEPGGRDPPQHFGGPPPLISPKPQHHSVPTALWNPVSLMDSTLETRRAPEGHPLHG
HPAPFEPSRQAAIPLVKVERVYCPEKAEEGPRKREAAPLDKYQPPPREAGGLEQQAFPPA
PAHFLAELEPSTQTVLGQPRAPLAPPAPFGETPGPLKPSSPYRPPAPRGPDPTYVYDEFL
QQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAEQPPLKLDTSS
EKLEFLQLFGLTTQQQKEELLTQKRRKRRRMLRERSPSPPTVQSKRQTPSPRLALSTRYS
PDEMNSSPNFEEKRKFLTIFNLTHISTEKRKDKERLVELLQAMKQRALSAAVADPLRNSP
RDSPAGSLSEPATQQASLDTEKPVGITASLSDTQKATEPGRLEQLRPQERVPEPAPASGE
KARPSETPGGRKGLSMLHYIRGPAPKDIPVPLSHGINGKSKPWEPFVAEEFAHQFHESVL
QSTQKALQKHRGSAAVLCAEQNHSIDASVHYNIPELRSSSRLPLPQRDGQQEPPAGRKGP
LAQEADPDSEEEDDDDGEDDDEDPPKRKWHGIEAIFEAYQEHVEEQNLERQVLQTQCRRL
EAQHYSLSLTAEQLSHSMAELRSQKQKIVSERERLQAELDHLRKCLALPAMHWPRGYFKG
YPR
NT seq
5772 nt
NT seq
+upstream
nt +downstream
nt
atgtactggctcaagcggccccaccagtgcgacgcgggtgcgggcggacgccgcgggggt
gccggggccccccgcgagtggaatgtcgcctacgcgctgggcgctgcggccggcgacgaa
gacgacgacgacggtggcagcggcggtggccccgggccccgcgcggccgccgaggagcct
cgagactcagagctgtcggagctgtcggacaccgaccccctctccgagcccgaccctgcc
gcgcgcgacgccgccagtccccaccaacacggggcgccggcggctcgggctgccccgggg
cccgggcctcgcgggggccgctgcccggagtggaggctggcgccgggcccttctcctgga
cggggcgcagagaccaccgcaccgcgggacgtggaaaaggaggaggtcccctcgaacctc
cgagtggacggggagcccaaggcgggcatccggcgccggcggaagggccatgggaggcac
tgggtcccggaggcccgggccagcgtcctgaggggcattcaggacccttggcaagggcct
gcagtccaggtggcccctgcagagagcatgagaggagcctcttccggcagggccgccaag
actcctgagagcaggccgctgggggagacctgcgggggctgctgcgtgtctgaggacagt
gacgtcaacatcaccagtgaggaggagggccaccaggaagagccttcctcaggcccccgt
ggccccggagacacagaaaacgatggcggccgcgtgccccgagctcctctgctggagagc
cgggccgcaccaccagagggcctttgctgctacatctgcgggtcggcgctgtccccggcc
tcgcagcaccagatccacgtgcagaagcaggagaagctggcccaggcccctttcttcccc
ttcctgtggctgcacagcccacccccgggggcacagcccatcagcgagggcggcagcacc
ctggtgtgcccctgctgcttctcgtccctcatgcagcagtggcagagcttcgagctggcc
gatgtgcccgtcctgcagaggctctacgtggtgcccctgaacagccacgcccccggcatg
gcctccaagggcaggaggctcccaagggaagagggcccacccgccggggccctgccagag
gcgtgctacctctgcggggaggactgtacccaggatgcccgggcagtagcctccaggatg
ctcaatggcaacaccaggggctccatgcatttccccttcctcagcctcctgccctgcccc
cccaatgcccagggccccaacaagcgctgtgaggtccgcagctgccccaagtgcttcagc
gtcctggaggacgtctgggccctgtaccgggcctgccagaacgaggagctcatcacctcc
gtgcagggcttcctgggcaggtaccaccaggctttctcggcctcagaccctgctctctcc
gagccgcccgcgtcggcccagggcagcccggcgtccatctgctacatctgcggggctgag
ctgggccctgggaaggagttccagctcaacgtgaacccttccagccgcttgggcgagaaa
gagcccttctttcccttcctcaccgtctatccgcccgccccgcgcgccaggcctgccgac
tccaccggcctggtggccacctgcgtgctttgctaccacgacctgctgggccagtggctg
cagcacgaggcccgcggcacccagcacgccgtcagcccctggtctcggcagtaccaagtg
gagacgttcgtgtgcttcttctgccggcaggagaagaagcggtgtcttgggctgaaggcc
gtgcgggtagcccggctgcccttgtttctctacaccctgcgagcgagccatagcctcgta
gtggacgacggccggcagctgataatcggcgcctgcacagagtgcgggaccctggtgtgt
gctggccaagggctcacccgccagggacccatgggctggagctccccagtggcagctgcg
aggaaggtcacctctgcatctctcgaggcatcgacggccgtccaccctccctcccgggag
cccgagcctcggccaggcgccccagcggagagcctgcccaggggccccaggacctcccag
gagcaggggccagcccggtgtcagcagagcagcctggacggggccggaccggaactcacg
ggcacaggcatgagccatgagcccaagtccccttcactagggatgctttccaccgcgacc
aggaccaccgccaccgtcaaccccctcaccccctcgccgctcaatggcgccctggtgccc
agtggcagccccgccaccagcagcgcgctgtcggcccaggccgcgccgtcctccagcttt
gctgccgcgctgcgcaagctcgccaaacaggcggaggagcccagagggtcttcactgagc
agtgagtcgtcccccgtctcctctccggccaccaaccacagctctccagccagcacaccc
aagcgcgtgcccatgggccccatcatcgtcccccccgggggccacagcgtccctagcacg
ccccccgtggtgaccatcgcccccaccaagaccgtcaatggcgtgtggaggagcgagagc
cggcagcaagacgctggctctcggggcagcggcagcggtcgggaacgcctcatcgtggag
gccccgctgccccaggagaaggcagggggcccggccatcccctcccacctgctcagcacc
ccctacccttttggcatctcccccagctcggtggtgcaggactcccgctttcctccgctg
aacctgcagcggcccgtgcaccacgtggtgccccccagcacggtgacagaggactacctg
cggagtttccggccctaccacaccaccgaggacctccgcgtgtcctccctgcctcccctg
ggcctggacccggccaccgccgcggcctactaccaccccagctacctggccccgcaccct
ttcccccacccggccttcaggatggacgactcctactgcctgtcagccctgcggtccccc
ttctaccctatccccacccccggctccctgcccccactgcatccatcagctatgcatctc
cacctctctggggtccgctacccgcccgagctctcgcactcgtccctggcggcgctgcac
tcggagcggatgtccagcctcagtgccgagaggatgcagatggacgaggagctgaggcgg
gagagggagcgtgagcgcgagcgggaggctgaccgcgagcgcgagaaggagcgcgagcgg
gagcgcgagaaggagcgcgagcgggagaaggagctggagcgcgagcgggagctggagcgt
cagcgggagcagcgggcccgcgagaaggagctgctggccgccaaggcgctggagccggcc
ttcctgcccgtggccgagctgcacgggctacggagccacgccgctgaggagcggggcaag
gcctcggagcagctgaccccaacccgagcagagaagctgaaggacgcgggcctgcaggcg
cccaagcccgtgcagcaccccctgcacccggcggccgccccgcaccaccccgtgcccggc
ctcctctccacccacggcctcttctctctgccgggcagcagtgcggccacggccctgctc
ctccagcgcaccaacgaggaggagaagtggctggcgcggcagcggcggctgcggcaggag
aaggaggaccgccagtcgcaggtgtctgagttccggcagcaggtgctggagcagcacctg
gacctgggccggccgccagcgcccgcggacgcggagcacaggcctgagagtgccaggccg
ggaccaaaccgtcacgagccgggaggccgcgaccccccgcagcactttggcggccccccg
cccctcatctcacccaagccccagcaccactcggtgcccacggccctctggaacccggtg
tccctgatggacagcacgctggagacacggcgcgcccccgagggccaccctctgcacggc
caccccgccccttttgagcccagccgccaggcggccatcccgctggtgaaggtggagagg
gtctactgccccgagaaagcggaggagggaccccggaagcgagaggccgcccccctggac
aagtaccagccgccgccccgcgaggcagggggcctggagcagcaggccttcccccctgcg
cctgcgcacttcctggcggagctcgagccgtccacccagaccgtcctgggccagccccgg
gccccgcttgccccgccggcccccttcggggagacccccgggcccctgaagccgagctcg
ccctaccggcccccggcgccacggggccccgaccccacctacgtctacgatgagttccta
cagcagcgacggaggctggtcagcaagctggacctggaggagcgccggcggcgggaggcc
caggagaaaggatactactacgacctggacgactcctacgacgagagtgacgaagaggag
gttagggcccacctccgctgtgtggccgagcagccgcccctcaaattggacacatcctct
gagaagctagagtttttgcaactttttggcttgaccacccaacagcagaaggaggaattg
ctgacccagaagcggaggaagcggcggcggatgctgagagaaagaagcccgtcgcccccg
acggttcagagcaagaggcagacgccttcgccgagactggcgctgtccacccgctacagc
cccgacgagatgaacagcagccccaacttcgaggagaagaggaagttcctgaccattttc
aacctgacccacatcagcactgagaagaggaaagacaaagagaggcttgttgagctgctc
caggccatgaagcagagggcgctgtcagcagcggtggcagacccgctcaggaactctccg
agggacagtcctgctgggtccctgagcgaaccagccacgcagcaagcctctctggatacg
gagaagcctgtgggtatcactgcttccttgtctgacacccagaaggccacggagcctggg
agactggaacagctccggccccaggagcgagtcccggagccagcccccgccagcggcgag
aaggccaggccgagcgagacccctgggggcaggaagggcctgagcatgctccactacatc
cggggccccgcgcccaaggacatccccgtgccgctgtcccacggcatcaacgggaagagc
aagccgtgggagccctttgtggcggaagagttcgcgcatcagttccacgagtccgtcctg
cagtccacccagaaagccctgcagaagcacagaggaagcgcagctgtgctgtgtgcagag
cagaaccacagcatcgacgcctctgtccactacaacatccccgagctgcggtcctccagc
cggctgcctctgccccagcgcgacgggcagcaggagccccccgccgggaggaagggcccc
ctggcacaggaggcggacccggactcagaggaggaggacgacgacgacggagaggacgac
gacgaggacccccccaagcgcaagtggcatgggatcgaggccatttttgaagcttaccag
gaacacgtagaagagcaaaatctagagcggcaggtgttacagacgcagtgcaggcggctg
gaggcccagcactacagcctcagtctcacggccgagcagctctcccacagcatggcggag
ttgaggagccagaaacagaagattgtttccgaaagggagcgactccaggcagaactggat
cacttacggaagtgccttgcgttgcctgcaatgcattggcctagaggttactttaaggga
tatcctaggtga
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integrated database retrieval system
