Phocoena sinus (vaquita): 116744379
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Entry
116744379 CDS
T07759
Symbol
IRX6
Name
(RefSeq) iroquois-class homeodomain protein IRX-6
KO
K24889
iroquois-class homeodomain protein IRX
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116744379 (IRX6)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
116744379 (IRX6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
116744379
NCBI-ProteinID:
XP_032469892
Ensembl:
ENSPSNG00000016785
UniProt:
A0A8C9E6G0
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Position
19:29859596..29865503
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AA seq
443 aa
AA seq
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MSFPHFGHPYGSASQFLVSASSNATCCESAQRSVPDVASGSTPAAALCFAPYDSRLLGSA
RPELGAALGIYGAPYSAAAAAQSYAGYLPYSPEPPTLYGALNPQYEFKEAAGNFTPGLAQ
PAAYYPYEQSLGQYQYDRYGSVEMGGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKI
MLAIITKMTLTQVSTWFANARRRLKKENKMTWAPKNKGGEERKEEGGAEELLGCLNGDTK
DVSASQEARGLSDLEDLEEEEEEEADEEEAVATATDRLAELHRDTQSLPAVQCAATREAR
PERKECSLAAPRFSFTEPPRSGETDFLRAEPGGPTLTMHYPRSERPRIWSLAHTAAASGV
EGAPPNLSRPRSPECHLIPGQPPGPGARPAVPRDSACEESSRVAKAFGNPSFAQQGLPLD
CAPCPRRRAPAVQCQYQSGAEAG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcactttggacacccttatggcagcgcttcccagtttctggtgtctgca
agttccaacgccacttgctgcgaatccgcccagcgttcggtcccagatgtggcctcaggc
tccaccccggcggccgcgctctgcttcgcaccctacgacagtcggctgctgggcagcgcg
aggcccgagctgggcgcggccttgggcatctatggagctccctactcggccgctgcagct
gcccagagctacgcaggctacctgccctacagcccggagccgcccacgctgtacggggcg
ctgaatccacagtatgaatttaaggaggctgcagggaactttacacccggcctggcacaa
ccagcagcctattatccctatgagcagagcctggggcagtaccagtatgaccggtatgga
tcggtggagatgggtggcgctgggcgcagaaagaacgccacccgggagaccactagcaca
ctcaaggcctggctcaacgagcaccgcaagaacccctaccccaccaagggcgagaagatc
atgctggccatcatcaccaagatgaccctcacccaggtgtccacctggttcgccaacgcg
cgccggcgcctcaagaaggagaacaagatgacttgggcgcccaagaacaaaggcggggag
gagaggaaggaggagggtggagcagaggaattgctgggctgcctaaatggtgacaccaaa
gacgtttcagctagccaggaggctcgggggctgagtgacctggaagacctggaggaagaa
gaggaagaggaggcggatgaagaggaggcagtggccacagctacggacaggctggctgag
ctccatcgagacactcagtcgctgccggcggtacagtgtgccgcaactcgagaggcccgg
ccggagcgcaaggagtgcagtctggcggcgccccgcttctcgttcactgagccccccagg
tcgggagaaaccgacttcctgcgggccgagccaggaggccccactttgaccatgcactac
ccgcgcagcgagagaccgcgcatctggtctctggcgcacactgcggcagccagcggcgtc
gaaggtgcacccccaaacctgtccaggccacgaagtcctgagtgccatctgattcctgga
cagcctccaggccccggcgcgcgacccgcggtccccagagactccgcgtgcgaagagtct
tcccgagtagccaaagcctttggaaacccctcgtttgcccaacagggcctgcctctggac
tgtgcgccatgcccgcggcggagggcgccggcagtgcagtgccagtaccagtcgggagca
gaagcaggttag
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