Phocoena sinus (vaquita): 116744426
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Entry
116744426 CDS
T07759
Symbol
SMG9
Name
(RefSeq) protein SMG9 isoform X1
KO
K18735
protein SMG9
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116744426 (SMG9)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
116744426 (SMG9)
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Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
AAA_30
DUF6079
Motif
Other DBs
NCBI-GeneID:
116744426
NCBI-ProteinID:
XP_032470080
Ensembl:
ENSPSNG00000012488
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Position
19:10614185..10633120
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AA seq
520 aa
AA seq
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MSESGHSQPGLYGVDRRRRWKEPGPGGPQNLSGPGGRERDYTAPWDRERRDGSEETSTAV
MQKTPIILSKPPAERSKQPPTPTAPAAPPAPAPLEKPIVLMKPREEGKGPAATVSASTPE
GTAPPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPERMKHS
IKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRAYVFRA
QSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYSLPHTYV
EMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSSSSGSDEG
TEYYPHLVFLQNKARREDFCPRKLRQMHLVIDQLMAHSHLRYKGTLSMLHCNVFPGLPPD
FLDSEVNLFLMPFMDSEAESETPPRAGPSSSPLFSLLPGYRGHPSFQSLVSKLRSQVMSM
ARPQLSHTILTEKNWFHYAARIWDGVKKSSALAEYSRLLA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtctgggcacagtcagcctgggctctatggggtagacaggcggcggcggtgg
aaggagccaggccctggcggcccccagaatctctctgggcctggtggtcgggagagggac
tacactgcaccttgggacagagagagacgggatggcagcgaagagacaagcacggcggtc
atgcagaaaacccccatcatcctctcaaagcctccagcagagcggtcaaagcagccaccg
actccaacggcccctgccgccccgcctgccccagcccctcttgagaagcccattgtcctc
atgaagccacgggaggaggggaaagggcctgcggccacagtgagtgcctccacccccgag
ggcactgccccaccaccccctgcagcccctgcgccacccaagggggagaaggaggggcag
agacccacacagcctgtgtaccagatccagaaccggggcatggggactgccgcgccggca
gccatggaccctgtcgtgggccaggccaaactgctgcccccagagcgcatgaagcacagc
atcaagttggtggatgaccagatgaattggtgcgacagtgccattgagtacctgttggat
cagactgacgtcttggtggttggtgtcctgggcctccaggggacaggcaagtccatggtt
atgtcgctgctgtcagccaacactcctgaggaggaccagagggcctatgtcttccgggcc
cagagcgccgaaatgaaggaacgagggggcaaccagaccagtggcattgacttctttatt
acccaggagcggatcgttttcctggacacgcagcccatcctgagcccctccatcttggac
cacctcatcaacaacgaccgcaagctgcctccagagtacagcctgccccacacctacgtg
gagatgcagtcactccagatcgctgccttcctcttcacggtctgccacgtggtgattgtc
gtccaggactggttcacggacctcagcctgtacaggttcctccagacagcagagatggtg
aagccctccaccccgtcccccagccatgagtccagcagctcgtcaggctccgatgaaggc
actgagtactacccacacctggtcttcctgcagaacaaagctcgccgggaggacttctgc
cctcggaagctgcggcagatgcacctggtgattgaccagctcatggcccactcccacctg
cggtacaagggtacgctgtccatgttacactgcaacgtcttccctgggctcccacccgac
ttcctggactccgaggtcaatctgttcctgatgcccttcatggacagtgaggcagagagt
gaaacccccccaagagcaggacccagttccagccccctcttctccctgctccctgggtac
cgaggccaccccagcttccagtccttggtgagcaagctccggagccaggtgatgtccatg
gcccggccgcagctgtcacacacgatcctcaccgagaagaactggttccactacgccgcc
cggatctgggacggggtgaaaaagtcctccgccctggccgagtacagccgcctgctggcc
tga
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