Phocoena sinus (vaquita): 116744478
Help
Entry
116744478 CDS
T07759
Symbol
CX3CL1
Name
(RefSeq) fractalkine
KO
K05508
C-X3-C motif chemokine 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04060
Cytokine-cytokine receptor interaction
psiu04061
Viral protein interaction with cytokine and cytokine receptor
psiu04062
Chemokine signaling pathway
psiu04148
Efferocytosis
psiu04668
TNF signaling pathway
psiu05163
Human cytomegalovirus infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
116744478 (CX3CL1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116744478 (CX3CL1)
04061 Viral protein interaction with cytokine and cytokine receptor
116744478 (CX3CL1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116744478 (CX3CL1)
09150 Organismal Systems
09151 Immune system
04062 Chemokine signaling pathway
116744478 (CX3CL1)
09160 Human Diseases
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
116744478 (CX3CL1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
psiu04052
]
116744478 (CX3CL1)
Cytokines and neuropeptides [BR:
psiu04052
]
Cytokines
Chemokines
116744478 (CX3CL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
CXCL16
Extensin_1
Motif
Other DBs
NCBI-GeneID:
116744478
NCBI-ProteinID:
XP_032470182
Ensembl:
ENSPSNG00000021092
UniProt:
A0A8C9EAF7
LinkDB
All DBs
Position
19:31563725..31574941
Genome browser
AA seq
423 aa
AA seq
DB search
MALLPLSWLLRLTALGHLIVLLAGQHHGVKKCNITCGKMTSEIPVARLVHYQRNQESCGR
RAIILKTMKEKLFCADPQEKWVQKAMEHLDRKAAARAPNGGTFEKQIGVGEPRTSPATRG
MDWSEASETKFTSESSSQEAQRAFGTSPELPPVVADSRGTRSPSTSKTPDGGPETTELFN
KPAVTTTTSWQSSTAYQPGADLEADGKASEAPSTQAPSTQTPSTQAPSTQTPSTQTPSTQ
TLPTQAPSTQAPSTQALTISHTVPEDNTGSEGQPGWIKGQDPTPENSLGSKELGPTSAHT
DAFMGPGSVSDVFVVPVSSEGVPSTDPLASGSWTPKVKESIHATVDPQRLGVLITPIPDS
QAATRRQAVGLLAFLGLLFCLGVAMFAYQSLQGCPRKMAGDMVEGLRYVPRSCGSNSYVL
VPV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctcttctacctctctcgtggctgctccgtttgactgcccttggccatctgatcgtg
ctgctggctggacagcaccacggtgtgaagaagtgtaacatcacgtgcggcaaaatgacc
tcggagatccccgtggctcgtctagttcactaccagcgcaatcaagaatcgtgcggcaga
cgcgccatcatcctgaagaccatgaaggaaaagttattctgtgctgacccacaggagaaa
tgggtccagaaagccatggagcatctagaccgcaaggctgctgctcgggctccaaatggt
ggcacattcgagaagcaaatcggcgtgggtgagcccaggaccagcccagccaccaggggg
atggactggtctgaggcctcagagaccaaattcacaagcgaaagcagtagccaggaggca
cagagggccttcgggacttccccagagctgccaccagtagtggctgattccagggggacc
aggtccccctccacttcaaagactccggatggagggcccgagacaactgagcttttcaac
aagcctgctgtcaccaccaccacgtcttggcagagttctaccgcctaccaacctggggca
gacctcgaggctgacgggaaagcctctgaggccccctccacccaggccccctccacccag
accccctccacccaggccccctccacccagaccccctccacccagaccccctccacccag
accctccccacccaggccccctccacccaggccccctccacccaggccctcactatttca
cacacagtcccagaggacaacactgggtccgaaggccaacctgggtggatcaagggacag
gaccccacaccagagaactctctagggtccaaagaattgggtcccacttcagctcacacg
gatgctttcatggggcccggcagtgtgtccgatgtcttcgtggtccctgtatcatctgaa
ggggtccccagcacggatccattggcctctggcagctggacccccaaggtcaaggagtcc
attcacgccaccgtggacccccagaggctgggtgtcctcatcactcccatccccgactcc
caggcagccacccgaaggcaggcagtggggctgttggccttcctcggtctcctcttctgc
ctgggggtggccatgtttgcctaccagagccttcagggctgcccccgcaagatggcagga
gacatggtggaggggcttcgctacgtcccccggagctgtggcagtaactcgtacgtcctg
gtgccagtatga
DBGET
integrated database retrieval system