KEGG   Phocoena sinus (vaquita): 116744478
Entry
116744478         CDS       T07759                                 
Symbol
CX3CL1
Name
(RefSeq) fractalkine
  KO
K05508  C-X3-C motif chemokine 1
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04060  Cytokine-cytokine receptor interaction
psiu04061  Viral protein interaction with cytokine and cytokine receptor
psiu04062  Chemokine signaling pathway
psiu04148  Efferocytosis
psiu04668  TNF signaling pathway
psiu05163  Human cytomegalovirus infection
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04668 TNF signaling pathway
    116744478 (CX3CL1)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    116744478 (CX3CL1)
   04061 Viral protein interaction with cytokine and cytokine receptor
    116744478 (CX3CL1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    116744478 (CX3CL1)
 09150 Organismal Systems
  09151 Immune system
   04062 Chemokine signaling pathway
    116744478 (CX3CL1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    116744478 (CX3CL1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:psiu04052]
    116744478 (CX3CL1)
Cytokines and neuropeptides [BR:psiu04052]
 Cytokines
  Chemokines
   116744478 (CX3CL1)
SSDB
Motif
Pfam: IL8 CXCL16 Extensin_1
Other DBs
NCBI-GeneID: 116744478
NCBI-ProteinID: XP_032470182
Ensembl: ENSPSNG00000021092
UniProt: A0A8C9EAF7
LinkDB
Position
19:31563725..31574941
AA seq 423 aa
MALLPLSWLLRLTALGHLIVLLAGQHHGVKKCNITCGKMTSEIPVARLVHYQRNQESCGR
RAIILKTMKEKLFCADPQEKWVQKAMEHLDRKAAARAPNGGTFEKQIGVGEPRTSPATRG
MDWSEASETKFTSESSSQEAQRAFGTSPELPPVVADSRGTRSPSTSKTPDGGPETTELFN
KPAVTTTTSWQSSTAYQPGADLEADGKASEAPSTQAPSTQTPSTQAPSTQTPSTQTPSTQ
TLPTQAPSTQAPSTQALTISHTVPEDNTGSEGQPGWIKGQDPTPENSLGSKELGPTSAHT
DAFMGPGSVSDVFVVPVSSEGVPSTDPLASGSWTPKVKESIHATVDPQRLGVLITPIPDS
QAATRRQAVGLLAFLGLLFCLGVAMFAYQSLQGCPRKMAGDMVEGLRYVPRSCGSNSYVL
VPV
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggctcttctacctctctcgtggctgctccgtttgactgcccttggccatctgatcgtg
ctgctggctggacagcaccacggtgtgaagaagtgtaacatcacgtgcggcaaaatgacc
tcggagatccccgtggctcgtctagttcactaccagcgcaatcaagaatcgtgcggcaga
cgcgccatcatcctgaagaccatgaaggaaaagttattctgtgctgacccacaggagaaa
tgggtccagaaagccatggagcatctagaccgcaaggctgctgctcgggctccaaatggt
ggcacattcgagaagcaaatcggcgtgggtgagcccaggaccagcccagccaccaggggg
atggactggtctgaggcctcagagaccaaattcacaagcgaaagcagtagccaggaggca
cagagggccttcgggacttccccagagctgccaccagtagtggctgattccagggggacc
aggtccccctccacttcaaagactccggatggagggcccgagacaactgagcttttcaac
aagcctgctgtcaccaccaccacgtcttggcagagttctaccgcctaccaacctggggca
gacctcgaggctgacgggaaagcctctgaggccccctccacccaggccccctccacccag
accccctccacccaggccccctccacccagaccccctccacccagaccccctccacccag
accctccccacccaggccccctccacccaggccccctccacccaggccctcactatttca
cacacagtcccagaggacaacactgggtccgaaggccaacctgggtggatcaagggacag
gaccccacaccagagaactctctagggtccaaagaattgggtcccacttcagctcacacg
gatgctttcatggggcccggcagtgtgtccgatgtcttcgtggtccctgtatcatctgaa
ggggtccccagcacggatccattggcctctggcagctggacccccaaggtcaaggagtcc
attcacgccaccgtggacccccagaggctgggtgtcctcatcactcccatccccgactcc
caggcagccacccgaaggcaggcagtggggctgttggccttcctcggtctcctcttctgc
ctgggggtggccatgtttgcctaccagagccttcagggctgcccccgcaagatggcagga
gacatggtggaggggcttcgctacgtcccccggagctgtggcagtaactcgtacgtcctg
gtgccagtatga

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