Phocoena sinus (vaquita): 116744533
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Entry
116744533 CDS
T07759
Symbol
SEMA6C
Name
(RefSeq) semaphorin-6C isoform X1
KO
K06842
semaphorin 6
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
116744533 (SEMA6C)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
116744533
NCBI-ProteinID:
XP_032470279
Ensembl:
ENSPSNG00000003085
UniProt:
A0A8C9BAX9
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Position
1:complement(110458504..110470008)
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AA seq
932 aa
AA seq
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MPREPRFMPLLLLLLLLSLPHTQAAFPQDPLPLLTSDLQGISPLSWFRGLEDDAVVAELG
LDFQRFLTLNRTLLVAARDHVFSFDLQAQEEGEGLVPNKYLTWRSQDMENCAVRGKLTDE
CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAV
FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFF
REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
QALTGPVNLYGRSALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTPV
SEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVLTFIKAHPLLDPAVPPATHQPLLTFTSR
ALLTQVAVDGMAGPYSNTTVLFLGSNDGTVLKVLPPWGQSGGPEPILLEEIDAYSPSRCS
GKRAAQTARQVTGLELDTEGHRLFVAFSGCIIYLPLSRCARHGACRRSCLASQDPYCGWD
SSRGCVDIRGPGGIDVHPAGNQESMEHDDCQDGATGSQSGTGDSAYGVRRDLPAASVSRA
VPIPLLLACVAAAFALGASVSGLLVSCACRRAHRRRSKDIETAGLPRPLSLRSLARLHGA
GPEPQPTSKDGGGAQTPQLYTTFLPPPEGVPPPELACLPTPESTPELPVKHLRHAGGPWE
WNQNGNNAKEGRGRARGGNTAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPP
RKEVEPPAAAPFTSRALPPEPAPTLFAGPCLLPRDCATPRRLDVPPEGKRPAPATRPALS
APAPRLGVGGSRRLPFSTHRAPPALLTRVPSGGPSRYSGGTGRHLLYLGRPEGHRGRALK
RVDVEKPQVPLKPPLVGPSSQSAVPSGNHFNF
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtgagccccgcttcatgcccttgctgctactgctgttgctgctctcacttccc
cacacccaggctgcctttccccaggaccccctccctctgctgacctctgacctgcaaggt
atttccccattatcctggttccggggcctggaggatgacgctgtggttgcagaacttggg
ctggactttcagagattcctgaccttgaaccggaccttgctagtggctgcacgggatcac
gttttctccttcgatcttcaagcccaagaagaaggggaggggctagtgcccaacaagtat
ctaacatggaggagtcaagacatggagaactgtgccgtgcgggggaagctgacggacgag
tgctacaactacattcgtgttctcgttccctgggactcccagacactccttgcctgtgga
acgaactcattcagccccgtgtgccgcagctatgggataacttcgctgcagcaggagggt
gaggagctgagcgggcaggctcgatgcccctttgatgccacccagtccaacgtggccgtc
tttgcagagggcagcctgtattcagccacagccgcggatttccaggccagtgatgctgtg
gtttacagaagccttgggcctcagcccccactccgctccgccaagtacgactccaagtgg
ctccgagagccacactttgtccacgctttggagcatggagaccatgtctacttcttcttc
cgagaagtctctgtggaggacgcccggctggggagggtacagttctcccgtgtggcccgt
gtgtgtaagcgtgacatgggcggctcacctcgggccttggaccgccactggacatctttc
ctgaagctgcggctcaactgctctgtccctggggactctaccttctattttgacgtctta
caggccttgacagggcctgtgaacttgtatggccgctctgctctctttggggtcttcacc
acccagaccaatagcatccccggctctgcggtctgtgccttctacctggatgatattgag
cgtgggtttgagggaaagttcaaggagcagagaagtctggatggggcctggacccctgtg
tctgaggacagggtcccctccccgaggccaggatcctgtgcaggagtaggtgtagctgca
ttgttcccctcttctcgagacctccctgatgatgtcctgaccttcatcaaggctcaccca
ctcctggaccctgccgtgccacctgccacccatcaacctctgcttaccttcaccagcagg
gccctactgacccaggtagctgtggatggcatggctggtccttacagtaataccacagtc
ctgttccttggctccaacgatgggacagtgctgaaggtgctgcccccatgggggcaatct
gggggccctgagcccattctgttggaagagatcgatgcctacagcccctcccggtgcagt
gggaagcgggcagcccaaacagcacggcaggtcacagggctggagctggacactgaaggt
cacaggctctttgtggctttttctggctgtatcatctacctccctctcagtcgatgtgcc
cggcatggggcctgtcggaggagctgtctggcttctcaggacccatactgtggatgggac
agctccagaggctgtgtggatatcaggggacctggtgggattgatgtgcatccagctggg
aaccaggaatccatggagcatgatgactgccaagatggagctactgggagtcagtctggc
acaggggattctgcttatggcgtgcgacgggacctcccggcagcctcagtctcccgcgcc
gtccctatcccactcctcctggcctgtgtggccgcagccttcgccctgggcgcctcggtc
tctggcctcctggtctcctgcgcttgtcgccgcgcccacagacgtcggagcaaggatatc
gagactgcggggctcccgcgccctctatcccttcgcagcttggcccgtctgcacggggcg
ggcccagagccgcagccaacgtccaaggacggagggggcgcacagacaccccagctctac
accaccttcctgcctcctcctgagggcgtacccccgccggagctggcttgcctgcccacc
ccggagtccacgccggagctgccggtcaagcacctccgccacgccgggggtccctgggag
tggaaccagaacgggaacaacgccaaggagggccggggccgcgcccggggcgggaacacg
gcgggcggccccgcgccgcgcgtgctggtgagaccgccgccgcccggctgtcccgggcag
gccgtggaagtcaccaccctggaggaactgctgcgctatctgcacggcccgcagccgccc
aggaaggaggtcgagcccccggccgccgcccctttcacctcgcgggcgctgccgcccgag
cccgcccccaccctctttgccggcccctgcctgctcccccgggactgtgccacgcctcgg
aggctggacgtgcccccggagggcaagcgcccggcccccgccacccggcctgctctctcc
gccccagctccccggctcggggtgggcggcagccggaggttgcccttctccacgcaccgt
gcaccccccgcgctgctcacccgagtcccttcgggaggcccctccaggtactccgggggt
accgggagacacctcctgtacctgggccggcctgaggggcaccggggccgcgccctgaag
agggtggatgtcgagaagccccaggtgcccctgaagcctcccctcgtcgggccttcctcg
cagtcggccgtccctagtggcaaccattttaacttttaa
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