Phocoena sinus (vaquita): 116744545
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Entry
116744545 CDS
T07759
Symbol
CARMIL2
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 2 isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116744545 (CARMIL2)
Membrane trafficking [BR:
psiu04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
116744545 (CARMIL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Motif
Other DBs
NCBI-GeneID:
116744545
NCBI-ProteinID:
XP_032470291
Ensembl:
ENSPSNG00000020231
LinkDB
All DBs
Position
19:40446504..40459208
Genome browser
AA seq
1404 aa
AA seq
DB search
MAQTPDGISCELRGEITRFLWPKEAELLLKTWLPEREGAEQGHVLALLRWRAYLLHTCLP
LRVDCTFSYLEVQAMALQETPPQVTFELESLPDLVLEFPGVAALEQLAQHIAAAIRKVFP
CSTLGKLFRRPTPPSMLARLERSSPSEATSPSSPCGGFSETYEALCDYNGFPFREEIQWD
VDTIYHRQGCRHFSLGDFSHLGSRDLALSVAALSYNLWFRCLSCVDMKLSLEVLEQILHM
MSQSSHLEELVLETCGLRGDFVRRLAQALAGHTSSGLRELSLAGNVLDDRGVAALSRHLE
HHPGALRRLTLAQTGLTPRGMRALGRALAFNAAFDSALTHLDLSGNPGALGASEDNGGLY
SFLSRPNVLTFLNLAGTDTALDTLFASLSRGCCASLTHLDASRNVFSRTKSRAAPDALQL
FLSRAATLRYLCLAGCKLPPDALRALLEGLALNTHMDDLYLDLSACELRSAGAQVIQDLV
CDAGAVSSLDLADNGFGSDMVTLVLAIGRSRSLRHVALGRNFNVRCKETLDDVLHRIVQL
MQDDDCPLQSLSVAESRLKLGASVLLRALGANPNLTALDISGNAMGDTGAKMLAKALRVN
TRLRSVVWDRNHTSALGLLDVAQALEQNRSLKAMPLPLNDVAQAQRSRPELTARAVHQIQ
ACLLRNNRADHASTDCTSHPKPLGLGSDPSEQEVNELCQSVQEHVELLGCGAGPQGEAAV
HQAEDAIQNANFSLSILPILHEAGSSPSHQWQLRQKLEGLLGQVGEVCRRDIQDFTQTTL
DTTRSLCPQMLQGPRWREQLEGVLGGSRGLPELLPEHLLQDAFTRLRDMRLSVTGTLAES
IVAQAVAGLSAARDRLVESLAQQATEATPPVIPALDGGEPSPLGPGELEGLFFPEEEKEK
ENEEEQKDDSPPQKWPESNRCLHLVPSTHSAAEEPEPEPELAAPGEDAEPQAGPSARGSP
SPAAPGPLAGPLPRMDLPPAGQPLRHPTRARPRPRRQHHHRPPPGGPQVPPALPQEGNGL
SARVDEGVEEFFSKRLIHQDRLWAPEEDPAAEGGTTPVPRTLRKKLGTLFAFKKPRSTRA
SRPDLETSPGAAPRSRKTTLGDLLRPPARPGRGEEAGGAEGGTSSPDPTRRSRPRYTRES
KAYSMILLPAEEEETTLGARPDKQQPLERGDTELAPTFEQRVQVMLQRIGMSRGSGSAEG
KRKQSKDGEIKKAGSDGDIMDSSTEAPPISIKSRTHSVSADPSCRPGPGGQGPESATWKT
LGQQLNAELRGRGWGQQDGPGPPSPCPSPSLRRASPSPDSLGLPEDSCLGSRNEDGQLRP
RPLLAGRRAVSVHEDQLQAPVERPRRLQRSPVLKRRPKLEAPPSPSIGSGLGAEPLPPQS
TEPSGPERSPPSPATDQRGGGPNP
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atggcccagacccccgacggcatatcctgcgagctgcgaggcgagatcaccaggttcctg
tggcccaaggaggcagagctgctgctgaaaacctggctgccagagcgggagggtgctgag
caaggtcatgtcctggcactgctgcgatggagagcctacctgctccacacctgccttccc
ctgagggtggactgcacgttcagctacctggaggtccaggccatggcgctgcaggagaca
ccccctcaggtcacctttgagctggagtccctgcctgatctggtcctggaatttcctggt
gtggctgccctggaacagctggcccagcacatcgctgctgccatcaggaaggtcttccct
tgctccacccttgggaagctattccggaggcccacgcccccctccatgctggctcggctg
gagagaagcagcccctcagaggccacctcgcccagcagcccctgtggtggcttttcggag
acatatgaggctctgtgtgactacaatggcttccctttccgagaggagattcagtgggat
gtggacaccatctaccatcgtcagggctgccgccatttcagcctaggcgacttcagccat
ctgggaagtcgggacctggccttgagtgtggccgccctgtcttacaacctgtggttccgg
tgcctctcctgcgtggacatgaagctgagccttgaggtcttggaacagattctgcacatg
atgagtcagtcatcccacctggaggagctggtgctggagacctgtggcctgaggggagac
tttgtccggcgactggcccaggccctggcagggcacacgagctccgggttgcgggaactc
agcctggcagggaacgtgctggatgaccgaggcgtggctgcactcagcagacacctggag
catcatcctggagccctgagaagactcaccctggcacagactgggttgacgccgcgagga
atgagggctctgggccgggcgctggctttcaatgcagcctttgactctgccctaacccac
ttggacctttctgggaatcccggggcactgggggcctcggaggacaatgggggcctctat
agtttcctgagccgtcctaatgttctgacgttcctgaatctcgcaggcactgacaccgcc
ctggacactctcttcgcctcgctgtcccgcggctgctgcgccagcctcacacacctcgac
gcttcgaggaacgtgttctcccgcacgaagtccagggctgcgccggacgcgctgcagctc
ttcctcagccgcgccgcgacgcttcggtacctgtgcctggcgggctgcaagctgccgccc
gacgctctcagggcgcttttggaaggcctcgcgctcaacacacacatggacgacctgtac
ctggacctcagcgcttgtgagctgcgctccgccggcgctcaggtgattcaagacttagtg
tgcgacgctggcgcagtgagctccctggatctggcagataatggcttcggctcagacatg
gtgactctggtgctggccatcgggaggagtcggtccctgcgacacgtggcgcttggaagg
aacttcaacgtccggtgcaaggagaccctggacgacgtcctgcaccggattgttcagctc
atgcaggatgacgactgtcccctgcagtctttgtccgtggctgagtcgcgactgaaactg
ggcgccagcgtcctgctccgggccctgggcgccaatcctaacctgacagccctggatatc
agcggcaacgccatgggggacaccggcgccaagatgctggccaaggcgcttcgggtcaac
acgaggctccggtctgtggtctgggaccggaaccacacgtctgctctgggcctgctggat
gtggcacaggccctggagcagaaccgcagcctgaaggccatgcctctgccactgaacgat
gtggcccaggcgcagcgcagccgccctgaactgacagcacgtgcggtgcatcagatccaa
gcctgtctcctgcggaacaaccgcgcagaccacgcttctactgactgcacctcccacccg
aagccactaggtctggggtcagacccctccgaacaggaagtgaatgaactatgtcagtcg
gtgcaggagcatgtggagttgctgggctgtggggctgggccccagggtgaagctgctgtg
caccaggccgaggatgccatccaaaacgccaacttctctctcagtattctccccattcta
catgaggctgggagctccccaagccaccaatggcagctgcggcagaagctggagggcctc
ctgggacaggtgggcgaggtctgccgccgggacattcaggacttcactcagaccacactg
gacaccacaaggagcctctgcccacagatgctgcagggacccaggtggagggagcagcta
gaaggggtcctgggaggctcaaggggtctcccagagctgctcccagagcacctgctgcaa
gatgccttcacgaggctcagggacatgcgcctgtcagtcacagggaccttggcagagagc
attgtggctcaggctgttgcgggtctgagtgcagcccgggatcggctggtggagagtctg
gctcaacaggcaacagaggcaacgccccctgtcataccagcactagatggaggcgagccc
agccccctggggcctggggaattggaaggtcttttcttccctgaggaggagaaggaaaag
gagaatgaagaggaacagaaggatgacagtcctccacagaagtggcctgaatccaaccgc
tgtcttcacctggtcccctccactcacagtgctgctgaggaaccagagccggagcccgag
ctggcggctccgggggaagatgcagagccgcaggcggggccatctgctcgtggctctccg
agccccgccgcccctgggcccctggccggcccattgcctcgcatggacctgccacccgcc
gggcagcccctgcgccatccgacccgggcccggccgcggccacggcgccagcaccaccac
cgcccgccgccggggggcccccaggtgcccccagccctgccgcaggaagggaatgggctc
agtgcccgtgtggacgagggcgtggaggaattcttctccaaaaggctgatccatcaggat
cgcctctgggcccccgaggaggacccggcagccgaggggggtaccacccctgtcccccgt
acacttcgaaagaagctgggcactctctttgccttcaagaagcctcgttcaacacgtgca
tcacggcctgatctagagaccagccctggggcagctccccgctctcgaaaaaccacactt
ggggacttgcttcggccaccagcccgtcctggccgtggtgaggaggctggtggggctgag
gggggcaccagcagccccgaccctacccgcaggagtcggcctcggtacactcgggaaagc
aaggcctactccatgatactgctacctgctgaggaggaggagacaacattgggtgccaga
cctgacaagcagcagcccctggagcggggagacacggagctggccccaacctttgaacag
cgagtacaagtgatgctgcagaggattggcatgagcagaggcagcgggagtgccgaaggc
aagaggaagcaaagcaaagatggagagatcaagaaggctggctcggatggtgacattatg
gacagttccacagaggctcctcccatctcgatcaagtcccgcacccactctgtgtctgct
gacccttcatgcagacctggtccagggggccaggggcccgagtctgccacctggaagaca
ctagggcagcagctgaatgcagagctcaggggccgtggctggggtcaacaggatggtccg
ggccccccctccccttgtcccagcccaagcctccgaagagccagcccctccccagacagc
ctgggcctcccagaggattcttgcttaggctccaggaatgaagatggccagctgaggccg
aggcctctcttggcgggtcgacgagcagtgtctgtgcatgaggaccagctccaggcccct
gttgaacggccccggcggctgcagcgctcacctgtcctcaagcgcaggccaaagcttgag
gcacctccatctccaagcataggatctggcctcggagccgagcctctacccccacagtct
acagagccctcaggccctgagcggagcccaccatccccagccacagaccaaagaggcggc
ggccccaacccctga
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