Phocoena sinus (vaquita): 116744576
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Entry
116744576 CDS
T07759
Symbol
LRFN3
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 3
KO
K16356
leucine-rich repeat and fibronectin type-III domain-containing protein 3
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psiu04515
]
116744576 (LRFN3)
04990 Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
116744576 (LRFN3)
Cell adhesion molecules [BR:
psiu04515
]
Immunoglobulin superfamily
SALM family
116744576 (LRFN3)
Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
116744576 (LRFN3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
fn3
Ig_2
LRR_9
ig
LRR_14
FN3_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
116744576
NCBI-ProteinID:
XP_032470417
Ensembl:
ENSPSNG00000021953
UniProt:
A0A8C9EDA7
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Position
19:complement(15379464..15386397)
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AA seq
628 aa
AA seq
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MAVLPLLLCLLPLAPASSPPQPATPSPCPRRCRCQTQSLPLSVLCPGAGLLFVPPSLDRR
AAELRLADNFIATVRRRDLANMTGLLHLSLSRNTIRHVAAGAFADLRALRALHLDGNRLT
SLGEGQLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLG
NVNTLGLDHNLLASVPAGAFSRLHKLARLDMTSNRLTTIPPDPLFSRLPLLARPRGSPAS
ALVLAFGGNPLHCNCELVWLRRLAREDDLEACASPPALGGRYFWAVGEEEFVCEPPVVTH
RSPPLAVPAGRPAALRCRAVGDPEPRVRWVSPQGRLLGNSSRARAFPNGTLELLVTEPGD
GGIFTCIAANAAGEATAAVELTVGPPPPPQLANSTSCDPPRDGDPDALTPPSAASVSASS
KAADAGPPTDRGVQVTEHGATAALVQWPDQRPFPGIRMYQIQYNSSADDILVYRMIPADS
SSFLLTDLASGRTYDLCVLAVYEDGATGLTATRPVGCHRFSTEPAPRPCGAPHAPFLGGT
MIIALGGVIVASVLVFIFVLLMRYKVHGGQPPGTTKAPAPVSSVCSQTNGALGPTPAPPA
PEPAAPRAHTVVQLDCEPWGPSHEPMGP
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcctccctctgctcctctgcctgctgccgctggcccccgcctcgtctccaccc
cagccagccacacccagcccgtgtccccgccgctgccgctgccagacacagtccctgccc
ctaagcgtgctgtgcccgggggcaggccttctgttcgttccaccctcgctggaccgccgg
gcggccgagctgcgcctggcggacaacttcatcgcgaccgtgcggcgccgtgacctggcc
aacatgacgggcctgctgcacctgagcttgtcacgcaacaccatccgccacgtggccgcc
ggcgccttcgctgaccttcgcgccctgcgcgctctgcacctggacggcaaccggctgacg
tcgctgggtgaggggcagctgcgcggcctggtcaacttacgccacctcatcctgagcaac
aaccagctggcagcgctggcggctggggccctggacgactgcgctgagacactcgaggac
ctcgacctctcctacaacaacctcgaacagctgccctgggaggcgttgggccgcctgggc
aacgtcaacacgctgggcctcgaccacaacctactggcttccgtgcccgccggcgccttt
tcccgcctacacaagctggcgcggctggacatgacctccaaccgcctaaccaccatcccg
cccgacccactgttctcccgcctgccactgctggccaggccgcgcggctcccccgcgtcc
gccctggtgctggccttcggcgggaaccccctgcactgcaactgcgagctggtgtggctc
cggcggctggcgcgggaggacgacctcgaggcctgcgcctccccgccggccctgggtggc
cgctacttctgggctgtgggtgaggaggagtttgtgtgcgagccccccgtggtgacacac
cgttcgccgcccctggccgtgcctgccggtcggccagccgccctgcgttgccgggcagtg
ggcgaccccgagccccgtgtgcgctgggtgtcaccccagggccggctgctgggcaactcg
agccgagctcgcgccttccctaacgggacgctggagctgctggtcaccgagccgggcgat
ggcggcatctttacctgcatcgcggccaatgcagctggcgaggccacggctgctgtggag
ctgaccgtgggccccccgccgcccccccagctagccaacagcacaagctgcgaccccccg
cgggacggggatcctgatgccctcaccccgccctctgctgcctcggtctctgcctcctcc
aaggcggctgacgccgggccccctaccgaccgtggcgtccaggtgactgagcatggggcc
acagctgctctagtccagtggccagatcagcggcctttcccaggcatccgcatgtaccaa
atccagtacaacagctcagccgacgacatcctcgtctacaggatgatcccagccgacagc
agctccttcctgttgacggacctggcatcaggccgcacctacgatctgtgtgtgctagcc
gtgtacgaggacggcgccacggggctgacagccacacggcctgtgggctgccaccgcttc
tccactgagccagcgccgcggccctgcggggccccgcacgcacccttcctgggcggcact
atgatcatcgcactgggtggtgttatcgtggcctcggtactggtcttcatcttcgtgctg
cttatgcgctacaaggtgcacggtggccaacccccgggcacgaccaaggcacctgcgcct
gtcagcagcgtctgctcccagaccaatggcgccctgggccccacgccggccccgccggct
cctgagccggccgcacccagggcccacaccgtggtccagctggactgtgagccctggggg
cccagccacgaacccatgggaccctag
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