Phocoena sinus (vaquita): 116744583
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Entry
116744583 CDS
T07759
Symbol
SSR2
Name
(RefSeq) translocon-associated protein subunit beta isoform X1
KO
K13250
translocon-associated protein subunit beta
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116744583 (SSR2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116744583 (SSR2)
Membrane trafficking [BR:
psiu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
TRAP complex
116744583 (SSR2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAP_beta
BatD
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
116744583
NCBI-ProteinID:
XP_032470443
Ensembl:
ENSPSNG00000001665
LinkDB
All DBs
Position
1:complement(114384727..114391993)
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AA seq
189 aa
AA seq
DB search
MRLLAFLALALFAVTQAEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELS
DDSFPPEDFGIVSGMLNVKWDRIAPYPLDAGASNVSHTVVLRPLKAGYFNFTSATITYLA
QEDGPVVIGFTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRK
YDTPKTKKN
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgctggcattcctggcattggctctatttgctgtcactcaagcagaggaagga
gccaggcttttggcctccaaatcactgctgaacagatatgccgtggaggggcgagacctg
accttacagtacaacatctacaatgttggctcaagtgctgcattagatgtggaattatct
gatgattccttccctccagaagactttggcattgtctctggaatgctcaacgtcaaatgg
gaccgaattgctccatatcctcttgacgctggtgctagcaacgtttcccacaccgtggtc
ctgcgccctctcaaggctggttatttcaacttcacctcagcaactattacttatctggcc
caggaggatgggcccgttgtgattggctttaccagtgcacccggacagggaggaatcctg
gctcagagggagtttgataggagattctccccccattttctggactgggcagccttcggg
gtcatgactctcccttccatcggcatccccctgctgttgtggtattccagcaagaggaaa
tatgacacccccaaaaccaagaagaactga
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