Phocoena sinus (vaquita): 116744617
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Entry
116744617 CDS
T07759
Symbol
CAPNS1
Name
(RefSeq) calpain small subunit 1
KO
K08583
calpain, small subunit 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116744617 (CAPNS1)
Peptidases and inhibitors [BR:
psiu01002
]
Cysteine peptidases
Family C2: calpain family
116744617 (CAPNS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
PMBR
Motif
Other DBs
NCBI-GeneID:
116744617
NCBI-ProteinID:
XP_032470535
Ensembl:
ENSPSNG00000021683
UniProt:
A0A8C9KXI3
LinkDB
All DBs
Position
19:complement(15225693..15232984)
Genome browser
AA seq
266 aa
AA seq
DB search
MFLVNSFLKGGGGGGGGGGLGGGLGNVLGGLISGGGGGGGGGGGGGGGGGGGGGTAMRIL
GGVISAISEAAAQYNPEPPPPRTHYSNIEANESEEVRQFRRLFAQLAGEDMEVSATELMN
ILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQAIYKRFD
IDCSGTIGSSELPGAFEAAGFHLNEHLYNMIIRRYSDEEGNMDFDNFISCLVRLDAMFRA
FKSLDKDGTGQIQVNIQEWLQLTMYS
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgttcctggttaactcgttcttgaagggtggaggaggcggcgggggaggcgggggcctg
ggcgggggcctagggaatgtgctcggaggcctgatcagcggcggcggcggcggcggcggc
ggcggcggaggaggaggtggcggaggcggcggcggtggcggaactgccatgcgcatcctg
ggcggggtcattagcgccattagtgaggcggctgcgcagtacaacccagagcccccgccc
cctcgcacccattactccaacatcgaggccaatgagagtgaggaggtccggcagttccgg
aggctctttgcccagctggctggagaggacatggaggtcagtgccacagaactcatgaac
attctcaacaaagtcgtgacccgacatcctgatctgaagactgatggttttggcattgac
acatgtcgcagcatggtggctgtcatggatagtgacacgaccggcaagctgggcttcgag
gaattcaagtacttgtggaacaacatcaaaaagtggcaggccatatacaaacggtttgac
attgactgttcagggaccattggcagcagtgaactcccgggggcctttgaggcagcagga
ttccacctgaatgagcatctctacaacatgatcatccgacgctactcagatgaggagggg
aacatggattttgacaacttcatcagctgcctggtcagactggatgccatgttccgtgcc
tttaaatctcttgacaaagatggcactggacaaatccaggtgaacatccaggagtggcta
cagctgaccatgtattcctga
DBGET
integrated database retrieval system
